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13_2_20cm_scaffold_2844

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2844_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1007
DNA (1005bp) protein (335aa)
RNA polymerase sigma factor RpoD n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368A0EB
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae
RNA polymerase sigma factor RpoD
13_2_20cm_scaffold_2844_2
unknown

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comp(1135..1416)
DNA (282bp) protein (94aa)

This feature has no annotations

13_2_20cm_scaffold_2844_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1430..1630)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VWN5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP80753.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
13_2_20cm_scaffold_2844_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1615..2274)
DNA (660bp) protein (220aa)
Gst n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PLU0_9BURK
Gst
Gst {ECO:0000313|EMBL:AHB04278.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
13_2_20cm_scaffold_2844_5
unknown

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2371..2640
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_scaffold_2844_6
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2974..4518)
DNA (1545bp) protein (515aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SXX5_POLSQ rbh
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABP34339.1}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" sour
13_2_20cm_scaffold_2844_7
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

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4794..5564
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B3Y4_TURPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM11991.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain
13_2_20cm_scaffold_2844_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5857..6477
DNA (621bp) protein (207aa)
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
UPF0301 protein Rmar_0197 id=4327963 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
conserved protein of unknown function
13_2_20cm_scaffold_2844_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6800..7333
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DEC4_BRAJP
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48021.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_2_20cm_scaffold_2844_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7330..8352
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HEC0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF83128.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
alcohol dehydrogenase
13_2_20cm_scaffold_2844_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(8429..9457)
DNA (1029bp) protein (343aa)
NADPH:quinone oxidoreductase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000370E315 rbh
NADPH:quinone reductase and related Zn-dependent oxidoreductase Tax=GWC2_Nitrospirae_57_9_curated
NADPH:quinone reductase and related Zn-dependent oxidoreductase
13_2_20cm_scaffold_2844_12

Not on your lists

comp(9696..10334)
DNA (639bp) protein (213aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F9F78
signal peptidase I
13_2_20cm_scaffold_2844_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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10965..11150
DNA (186bp) protein (62aa)
alkyl hydroperoxide reductase (EC:1.11.1.7) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peroxidase (EC:1.11.1.7)
Peroxiredoxin n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLH8_9RHIZ
13_2_20cm_scaffold_2844_14
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11268..11981
DNA (714bp) protein (238aa)
glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase {ECO:0000313|EMBL:AEK60328.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AEK60328.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacterac
Glutathione S-transferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AHQ0_COLFT rbh
13_2_20cm_scaffold_2844_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12004..12174)
DNA (171bp) protein (57aa)
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 15 items

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