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13_2_20cm_scaffold_2856

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2856_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..358
-----------------
DNA (357bp)
protein (119aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG90435.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2856_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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452..1696
-----------------
DNA (1245bp)
protein (415aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGQ9_CHLTF
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_2_20cm_scaffold_2856_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1698..2876
-----------------
DNA (1179bp)
protein (393aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_2_20cm_scaffold_2856_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2972..3700
-----------------
DNA (729bp)
protein (243aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_2856_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3718..4893
-----------------
DNA (1176bp)
protein (392aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G3_GEMAT
aminotransferase class V
Aminotransferase class V {ECO:0000313|EMBL:AHG90429.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2856_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4913..6091
-----------------
DNA (1179bp)
protein (393aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT
tRNA-specific 2-thiouridylase mnmA
13_2_20cm_scaffold_2856_7
unknown

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6229..7401
-----------------
DNA (1173bp)
protein (391aa)
hypothetical protein
13_2_20cm_scaffold_2856_8
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7477..7833
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y308_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO76787.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
13_2_20cm_scaffold_2856_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7959..8180
-----------------
DNA (222bp)
protein (74aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_2856_10
unknown

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8177..8659
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

13_2_20cm_scaffold_2856_11
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8672..9067
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein; K08972 putative membrane protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein; K08972 putative membrane protein id=14431488 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_2856_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9276..10436
-----------------
DNA (1161bp)
protein (387aa)
Putative lipoprotein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MV42_CORCM
Xaa-Pro aminopeptidase family enzyme Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M24
13_2_20cm_scaffold_2856_13
unknown

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comp(10508..10834)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

13_2_20cm_scaffold_2856_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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11073..11573
-----------------
DNA (501bp)
protein (167aa)
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative amino acid aldolase or racemase id=4650281 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
alanine racemase
13_2_20cm_scaffold_2856_15
unknown

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11660..11938
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

13_2_20cm_scaffold_2856_16
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11935..12357
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative uncharacterized protein id=2637582 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Displaying 16 items

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