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13_2_20cm_scaffold_3057

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3057_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..1375
DNA (1374bp) protein (458aa)
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AMP-dependent synthetase and ligase id=2312813 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
13_2_20cm_scaffold_3057_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1376..2383
DNA (1008bp) protein (336aa)
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family n=2 Tax=Paenibacillus RepID=F5LLM0_9BACL rbh
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase family protein
13_2_20cm_scaffold_3057_3
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2380..3084
DNA (705bp) protein (235aa)
NHL repeat-containing protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y4D1_9RHIZ
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:AIQ92064.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylob
13_2_20cm_scaffold_3057_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3320..3571
DNA (252bp) protein (84aa)
putative gualylate cyclase protein id=14626339 bin=bin7_NC10_sister species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative gualylate cyclase protein Tax=CSP1_6_Rokubacteria
putative gualylate cyclase protein
13_2_20cm_scaffold_3057_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3597..6830
DNA (3234bp) protein (1078aa)
adenylate cyclase (EC:4.6.1.1) id=14626338 bin=bin7_NC10_sister species=Marinobacterium rhizophilum genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate cyclase (EC:4.6.1.1) Tax=CSP1_6_Rokubacteria
adenylyl cyclase
13_2_20cm_scaffold_3057_6
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6688..7107)
DNA (420bp) protein (140aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I039_9PSEU
PPOX class F420-dependent enzyme Tax=RBG_16_Gammaproteobacteria_66_13_curated
hypothetical protein
13_2_20cm_scaffold_3057_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7119..7979)
DNA (861bp) protein (287aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=GWA2_Rokubacteria_73_35_curated
Sulfurtransferase id=2213480 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhodanese domain-containing protein
13_2_20cm_scaffold_3057_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7976..8653)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C1CE0
SCO1/SenC family protein/methylamine utilization protein MauG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCO1/SenC family protein/methylamine utilization protein MauG
13_2_20cm_scaffold_3057_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8676..10001)
DNA (1326bp) protein (442aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT91_9BURK
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:EHR68964.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales
Selenium-binding protein, putative
13_2_20cm_scaffold_3057_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10046..11341)
DNA (1296bp) protein (432aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Leptospira alexanderi serovar Manhao 3 str. L 60 RepID=V6IFL3_9LEPT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
13_2_20cm_scaffold_3057_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11916..12629)
DNA (714bp) protein (238aa)
putative phosphoglycolate phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Phosphoglycolate phosphatase id=4930053 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative hydrolase
13_2_20cm_scaffold_3057_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12626..12958)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP06_NITGG
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_2_20cm_scaffold_3057_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12936..13211)
DNA (276bp) protein (92aa)
pyrrolidone-carboxylate peptidase (EC:3.4.19.3); K01304 pyroglutamyl-peptidase [EC:3.4.19.3] Tax=GWA2_Rokubacteria_73_35_curated
pyroglutamyl-peptidase I (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase id=4930056 bin=GWA2_Methylomirabilis_73_35 species=Pyrococcus furiosus genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3057_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13205..13486)
DNA (282bp) protein (94aa)
pcp; pyrrolidone-carboxylate peptidase; K01304 pyroglutamyl-peptidase [EC:3.4.19.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyroglutamyl-peptidase I (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase id=4930056 bin=GWA2_Methylomirabilis_73_35 species=Pyrococcus furiosus genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3057_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13526..14659)
DNA (1134bp) protein (378aa)
Major facilitator superfamily MFS_1 transporter id=4930061 bin=GWA2_Methylomirabilis_73_35 species=Sporosarcina newyorkensis genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
major facilitator superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_3057_16
unknown

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14762..15316
DNA (555bp) protein (185aa)

This feature has no annotations

13_2_20cm_scaffold_3057_17
unknown

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comp(15313..15414)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 17 items

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