name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_2_20cm_scaffold_3065_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(2..406)
----------------- DNA (405bp) protein (135aa) |
Tetratricopeptide TPR_2 id=3960130 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
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13_2_20cm_scaffold_3065_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(403..810)
----------------- DNA (408bp) protein (136aa) |
Kelch repeat-containing protein id=3960133 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Kelch repeat-containing protein Tax=GWA2_Rokubacteria_73_35_curated
Kelch repeat-containing protein
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13_2_20cm_scaffold_3065_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(1309..2589)
----------------- DNA (1281bp) protein (427aa) |
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase id=4424809 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
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13_2_20cm_scaffold_3065_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(2628..3254)
----------------- DNA (627bp) protein (209aa) |
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase id=4424810 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
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13_2_20cm_scaffold_3065_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
3370..4086
----------------- DNA (717bp) protein (239aa) |
DtxR family iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=14625222 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
DtxR family iron dependent repressor
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13_2_20cm_scaffold_3065_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
4083..4439
----------------- DNA (357bp) protein (119aa) |
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
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13_2_20cm_scaffold_3065_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(4441..5385)
----------------- DNA (945bp) protein (315aa) |
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c family protein id=4062400 bin=GWF2_Methylomirabilis_70_14 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_2_20cm_scaffold_3065_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(5382..5855)
----------------- DNA (474bp) protein (158aa) |
cycL; cytochrome c-type biogenesis protein cycL Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c-type biogenesis protein cycL id=4062401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cycL; cytochrome c-type biogenesis protein cycL
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13_2_20cm_scaffold_3065_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(5852..6388)
----------------- DNA (537bp) protein (179aa) |
ccmG; periplasmic thioredoxin (cytochrome c biogenesis) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Periplasmic thioredoxin (Cytochrome c biogenesis) id=4062402 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
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13_2_20cm_scaffold_3065_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6385..8328)
----------------- DNA (1944bp) protein (648aa) |
cycK; cytochrome c-type biogenesis protein cycK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cycK; cytochrome c-type biogenesis protein cycK id=14625137 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cycK; cytochrome c-type biogenesis protein cycK
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13_2_20cm_scaffold_3065_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(8325..8765)
----------------- DNA (441bp) protein (147aa) |
ccmE; cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ccmE; cytochrome c-type biogenesis protein CcmE id=14625136 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccmE; cytochrome c-type biogenesis protein CcmE
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13_2_20cm_scaffold_3065_12
unknown
|
Not on your lists |
comp(8762..8953)
----------------- DNA (192bp) protein (64aa) |
This feature has no annotations |
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13_2_20cm_scaffold_3065_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(8950..9441)
----------------- DNA (492bp) protein (164aa) |
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) Tax=GWA2_Rokubacteria_73_35_curated
Heme ABC transporter (Heme exporter protein C), permease protein (Cytochrome c biogenesis) id=4343481 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
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13_2_20cm_scaffold_3065_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(9539..10189)
----------------- DNA (651bp) protein (217aa) |
Heme exporter, protein B Tax=GWA2_Rokubacteria_73_35_curated
Cytochrome c-type biogenesis protein CcmB id=4343483 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmB; heme exporter protein CcmB
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13_2_20cm_scaffold_3065_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(10213..10932)
----------------- DNA (720bp) protein (240aa) |
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4343485 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_2_20cm_scaffold_3065_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
11060..11986
----------------- DNA (927bp) protein (309aa) |
Binding-protein-dependent transport systems inner membrane component id=3980008 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein; K15581 oligopeptide transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport system inner membrane protein
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13_2_20cm_scaffold_3065_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
12096..12881
----------------- DNA (786bp) protein (262aa) |
Binding-protein-dependent transport systems inner membrane component id=3980007 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
binding-protein-dependent transport system inner membrane protein
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13_2_20cm_scaffold_3065_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
12900..13418
----------------- DNA (519bp) protein (173aa) |
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein id=3741107 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
family 5 extracellular solute-binding protein
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13_2_20cm_scaffold_3065_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
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Not on your lists |
13385..13921
----------------- DNA (537bp) protein (179aa) |
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Oligopeptide ABC transporter periplasmic oligopeptide-binding protein id=3741107 bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter periplasmic oligopeptide-binding protein
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13_2_20cm_scaffold_3065_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
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Not on your lists |
13971..14468
----------------- DNA (498bp) protein (166aa) |
Extracellular solute-binding protein family 5 id=2591445 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
family 5 extracellular solute-binding protein
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13_2_20cm_scaffold_3065_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(14518..15369)
----------------- DNA (852bp) protein (284aa) |
peptidase M48, Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=14625131 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protease HtpX
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13_2_20cm_scaffold_3065_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15508..16017
----------------- DNA (510bp) protein (170aa) |
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4343489 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_2_20cm_scaffold_3065_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
16027..16209
----------------- DNA (183bp) protein (61aa) |
rpmF; 50S ribosomal protein L32 RpmF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L32 id=4343491 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmF; 50S ribosomal protein L32 RpmF
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13_2_20cm_scaffold_3065_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
16234..16833
----------------- DNA (600bp) protein (200aa) |
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=GWA2_Rokubacteria_73_35_curated
Phosphate acyltransferase id=2547032 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fatty acid/phospholipid synthesis protein PlsX
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