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13_2_20cm_scaffold_2914

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2914_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..204
DNA (204bp) protein (68aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PfkB domain protein id=4381580 bin=GWC2_Ignavibacteria_56_12 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
PfkB domain protein
13_2_20cm_scaffold_2914_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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201..1253
DNA (1053bp) protein (351aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
mannonate dehydratase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395AA7A
Mannonate dehydratase
13_2_20cm_scaffold_2914_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1288..2445
DNA (1158bp) protein (386aa)
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG87912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hexuronate transporter; K08191 MFS transporter, ACS family, hexuronate transporter id=12555863 bin=CNBR_ACIDO species=Xanthomonas albilineans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_scaffold_2914_4

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2442..3488
DNA (1047bp) protein (349aa)
Oxidoreductase domain-containing protein n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CBZ6_RHOBT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48721.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dehydrogenase
13_2_20cm_scaffold_2914_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3485..4501
DNA (1017bp) protein (339aa)
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG93135.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribose/xylose/arabinose/galactoside ABC transporter permease id=17279468 bin=RBG_16_Aminicenantes_63_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_2_20cm_scaffold_2914_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4498..5361
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EE525
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG93136.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5358..5558
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037383FA
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_2_20cm_scaffold_2914_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5555..6067
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C9V5_9FLAO
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG93137.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6071..6925
DNA (855bp) protein (285aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AUD8_MARSH
fumarylacetoacetate (FAA) hydrolase rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AHG93138.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6912..7691
DNA (780bp) protein (260aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJG2_9CHLR
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AHG93139.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7694..8995
DNA (1302bp) protein (434aa)
fuconate dehydratase n=1 Tax=Schlesneria paludicola RepID=UPI00029A30D3 rbh
Mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AHG93141.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9060..10391
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000379499F
glycoside hydrolase family 29 (alpha-L-fucosidase)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:AHG93142.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10759..11508
DNA (750bp) protein (250aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WUL5_9NOST
Alcohol dehydrogenase GroES domain protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:AHG93143.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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11487..12215
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UG0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86710.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_2914_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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12212..13186
DNA (975bp) protein (325aa)
iron-sulfur cluster binding protein
Iron-sulfur cluster binding protein id=14626470 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Iron-sulfur cluster binding protein Tax=CSP1_6_Rokubacteria
13_2_20cm_scaffold_2914_16
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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13183..13560
DNA (378bp) protein (126aa)
Iron-sulfur cluster binding protein n=1 Tax=Frankia sp. CN3 RepID=G6HE62_9ACTO
iron-sulfur cluster binding protein
(4Fe-4S) protein {ECO:0000313|EMBL:KHD78032.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
13_2_20cm_scaffold_2914_17
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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13697..14221
DNA (525bp) protein (175aa)
lactate utilization protein B/C; K00782 hypothetical protein id=24440555 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfovibrio sp. X2 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K00782 hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
13_2_20cm_scaffold_2914_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14218..15237
DNA (1020bp) protein (340aa)
Periplasmic binding protein domain protein
Periplasmic binding protein domain protein {ECO:0000313|EMBL:AHG93144.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sugar ABC transporter substrate-binding protein id=17279464 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_2_20cm_scaffold_2914_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15234..16763
DNA (1530bp) protein (510aa)
ABC-type sugar transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDT0_SINAD
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG93145.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_20
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16750..17082
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIN3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KGE15305.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
hypothetical protein
13_2_20cm_scaffold_2914_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17084..18355)
DNA (1272bp) protein (424aa)
Alginate lyase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ATY9_9BACT
Alginate lyase
Alginate lyase {ECO:0000313|EMBL:AHG88729.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(18406..19362)
DNA (957bp) protein (319aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWN1_HALH1
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG93156.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2914_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(19359..20171)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2W6_MELRP
Alginate lyase
Alginate lyase {ECO:0000313|EMBL:AHG93078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 23 items

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