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13_2_20cm_scaffold_3258

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3258_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..530
DNA (528bp) protein (176aa)
Bacterial pre-peptidase C-terminal domain protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZCN8_9CAUL
gluconolactonase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trypsin-like serine protease with C-terminal PDZ domain
13_2_20cm_scaffold_3258_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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527..1096
DNA (570bp) protein (190aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG23_RHOMR
phosphoribosylglycinamide formyltransferase
13_2_20cm_scaffold_3258_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1093..1929
DNA (837bp) protein (279aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
13_2_20cm_scaffold_3258_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1926..2975
DNA (1050bp) protein (350aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase family protein
13_2_20cm_scaffold_3258_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3801..4331
DNA (531bp) protein (177aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W1_GEMAT
Bifunctional purine biosynthesis protein purH
13_2_20cm_scaffold_3258_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4411..6519
DNA (2109bp) protein (703aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K8_GEMAT rbh
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3258_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7006..8949
DNA (1944bp) protein (648aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3258_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(8946..10061)
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1D7_LEPCP
RND family efflux transporter MFP subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
RND family efflux transporter MFP subunit
13_2_20cm_scaffold_3258_9
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10061..11356)
DNA (1296bp) protein (432aa)
Putative outer membrane macrolide efflux protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKE9_MYXFH
putative outer membrane macrolide efflux protein
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvu
13_2_20cm_scaffold_3258_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11356..11586)
DNA (231bp) protein (77aa)
multidrug transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B6815A
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=GWC2_Gemmatimonadetes_71_10_curated
acriflavin resistance protein
13_2_20cm_scaffold_3258_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(11599..14409)
DNA (2811bp) protein (937aa)
Cation/multidrug efflux pump n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLP3_9BACT rbh
hydrophobic/amphiphilic exporter-1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hydrophobic/amphiphilic exporter-1
13_2_20cm_scaffold_3258_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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14760..17108
DNA (2349bp) protein (783aa)
Peptidase M1 membrane alanine aminopeptidase id=4577406 bin=GWA2_Ignavibacteria-rel_35_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
peptidase M1 membrane alanine aminopeptidase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
peptidase M1 membrane alanine aminopeptidase
13_2_20cm_scaffold_3258_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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17109..17783
DNA (675bp) protein (225aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0S9_CONWI
CDP-alcohol phosphatidyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
CDP-alcohol phosphatidyltransferase
13_2_20cm_scaffold_3258_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18274..19239
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A837_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_3258_15
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19227..20789)
DNA (1563bp) protein (521aa)
FAD-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI000361E570 rbh
FAD-binding protein {ECO:0000313|EMBL:KJC53602.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LT
oxidoreductase
13_2_20cm_scaffold_3258_16
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20806..21246
DNA (441bp) protein (147aa)
UPI0003CE8BF3 related cluster n=1 Tax=unknown RepID=UPI0003CE8BF3
Uncharacterized protein {ECO:0000313|EMBL:ESY76804.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
13_2_20cm_scaffold_3258_17
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21192..22370
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5E50E
Uncharacterized protein {ECO:0000313|EMBL:KFN44529.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
hypothetical protein
13_2_20cm_scaffold_3258_18

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comp(22436..22924)
DNA (489bp) protein (163aa)
lipoprotein id=12556841 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KKN19887.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PEGA domain-containing protein
13_2_20cm_scaffold_3258_19
unknown

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23233..25029
DNA (1797bp) protein (599aa)

This feature has no annotations

13_2_20cm_scaffold_3258_20
unknown

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25038..25640
DNA (603bp) protein (201aa)

This feature has no annotations

Displaying 20 items

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