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13_2_20cm_scaffold_3304

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3304_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(61..576)
DNA (516bp) protein (172aa)
hypothetical protein
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
Putative uncharacterized protein id=5241273 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_2_20cm_scaffold_3304_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(655..939)
DNA (285bp) protein (95aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_3304_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(936..1601)
DNA (666bp) protein (222aa)
hypothetical protein; K03151 thiamine biosynthesis protein ThiI Tax=RBG_16_Euryarchaeota_67_27_curated
thiamine biosynthesis protein ThiI
thiamine biosynthesis/tRNA modification protein ThiI; K03151 thiamine biosynthesis protein ThiI id=5241324 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_2_20cm_scaffold_3304_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1603..2523)
DNA (921bp) protein (307aa)
Putative molybdopterin biosynthesis MoeB protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L075_THERP
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase Tax=RBG_16_Euryarchaeota_67_27_curated
putative molybdopterin biosynthesis MoeB protein
13_2_20cm_scaffold_3304_5
unknown

Not on your lists

2790..3047
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_3304_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3119..3259)
DNA (141bp) protein (47aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_scaffold_3304_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3339..4100)
DNA (762bp) protein (254aa)
RNA-binding protein, containing S1 domain n=2 Tax=Euryarchaeota RepID=M9SH91_9EURY
RNA-binding protein, containing S1 domain Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA-binding protein, containing S1 domain
13_2_20cm_scaffold_3304_8
unknown

Not on your lists

4287..4745
DNA (459bp) protein (153aa)

This feature has no annotations

13_2_20cm_scaffold_3304_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(4690..5496)
DNA (807bp) protein (269aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
small GTP-binding protein
13_2_20cm_scaffold_3304_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5985..6815
DNA (831bp) protein (277aa)
ctaE; putative cytochrome c oxidase subunit 3 (EC:1.9.3.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cytochrome-c oxidase (EC:1.9.3.1)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
13_2_20cm_scaffold_3304_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6824..7132
DNA (309bp) protein (103aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_3304_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7371..7679
DNA (309bp) protein (103aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_3304_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7715..7954
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_3304_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7951..8187
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_3304_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8198..9235
DNA (1038bp) protein (346aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB70_ACIB4 rbh
S-methyl-5-thioribose-1-phosphate isomerase Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_3304_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9277..10347
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
rRNA biogenesis protein Nop5/Nop56 Tax=RBG_16_Euryarchaeota_67_27_curated
putative NOP5 family protein
13_2_20cm_scaffold_3304_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


10390..10776
DNA (387bp) protein (129aa)
Translation initiation factor 5A n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HGN0_ACIS0
translation initiation factor 5A precursor (eIF-5A) Tax=RBG_16_Euryarchaeota_68_13_curated
translation initiation factor eIF-5A
13_2_20cm_scaffold_3304_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

10820..11620
DNA (801bp) protein (267aa)
Agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=mine drainage metagenome RepID=T0YEH6_9ZZZZ
agmatinase Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_3304_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

11863..13323
DNA (1461bp) protein (487aa)
tRNA-splicing ligase RtcB n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HM66_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_scaffold_3304_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13320..13838
DNA (519bp) protein (173aa)
Archaemetzincin n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=AMZA_METKA
peptidase zinc-dependent; K06974 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Zn-dependent protease
13_2_20cm_scaffold_3304_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13813..14544)
DNA (732bp) protein (244aa)
MerR family transcriptional regulator n=1 Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI00037D3F5E
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
MerR family transcriptional regulator
13_2_20cm_scaffold_3304_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

14591..14842
DNA (252bp) protein (84aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Hypothetical cytosolic protein id=3518081 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
13_2_20cm_scaffold_3304_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14832..16043)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9U0_9ARCH
major facilitator family transporter Tax=RBG_16_Euryarchaeota_67_27_curated
MFS transporter family protein
13_2_20cm_scaffold_3304_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16048..17127)
DNA (1080bp) protein (360aa)
Calcium/proton exchanger Cax n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSD2_9FIRM
calcium/proton exchanger Cax Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
calcium/proton exchanger Cax
13_2_20cm_scaffold_3304_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

17201..18637
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368EB44
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region Tax=RBG_16_Euryarchaeota_67_27_curated
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
13_2_20cm_scaffold_3304_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18703..19473
DNA (771bp) protein (257aa)
Putative ICC-like phosphoesterase n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJX1_9EURY
putative ICC-like phosphoesterase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative ICC-like phosphoesterase
13_2_20cm_scaffold_3304_27
unknown

Not on your lists

19487..19840
DNA (354bp) protein (118aa)

This feature has no annotations

13_2_20cm_scaffold_3304_28
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(19968..20324)
DNA (357bp) protein (119aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein; K07131 Tax=RBG_16_Euryarchaeota_67_27_curated
Roadblock/LC7 family protein
13_2_20cm_scaffold_3304_29
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(20321..20728)
DNA (408bp) protein (136aa)
V4R domain protein n=1 Tax=mine drainage metagenome RepID=T0ZKA8_9ZZZZ
V4R domain protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_3304_30
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(20802..20906)
DNA (105bp) protein (35aa)
signal transduction protein with CBS domains Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 30 items

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