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13_2_20cm_scaffold_3123

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3123_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..489
DNA (489bp) protein (163aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_3123_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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486..1175
DNA (690bp) protein (230aa)
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted glutamine amidotransferases Tax=GWA2_Rokubacteria_73_35_curated
peptidase C26
13_2_20cm_scaffold_3123_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1172..1594
DNA (423bp) protein (141aa)
Fis family transcriptional regulator n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5B0E0
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Fis family transcriptional regulator
13_2_20cm_scaffold_3123_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1658..2365)
DNA (708bp) protein (236aa)
Uncharacterized protein (Fragment) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNI8_9BACT
hypothetical protein
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_3123_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2758..4257
DNA (1500bp) protein (500aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
13_2_20cm_scaffold_3123_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4264..5322
DNA (1059bp) protein (353aa)
glycosyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glycosyl transferase group 1 family protein id=16790113 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
group 1 glycosyl transferase
13_2_20cm_scaffold_3123_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5334..6860
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
glycosyl transferase family 2
13_2_20cm_scaffold_3123_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6857..7813
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6D2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3123_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7814..8032)
DNA (219bp) protein (73aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_3123_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8127..9224
DNA (1098bp) protein (366aa)
Putative glycine oxidase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IEZ2_AZOC5
glycine oxidase ThiO Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glycine oxidase
13_2_20cm_scaffold_3123_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9638..10168
DNA (531bp) protein (177aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_3123_12
unknown

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10260..10664
DNA (405bp) protein (135aa)

This feature has no annotations

13_2_20cm_scaffold_3123_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10756..11673
DNA (918bp) protein (306aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Lipoyl synthase
Lipoyl synthase id=4828152 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_3123_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11673..12677
DNA (1005bp) protein (335aa)
pdhA; pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
pdhA; pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D2_GEMAT
13_2_20cm_scaffold_3123_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12677..13660
DNA (984bp) protein (328aa)
pdhB; pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D1_GEMAT
Transketolase central region
13_2_20cm_scaffold_3123_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13668..14942
DNA (1275bp) protein (425aa)
pdhC; pyruvate dehydrogenase E2 component (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cur
Pyruvate dehydrogenase E2 component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D0_GEMAT
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
13_2_20cm_scaffold_3123_17
unknown

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comp(15337..15630)
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_scaffold_3123_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15843..16442
DNA (600bp) protein (200aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dihydrolipoyl dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C7_GEMAT
dihydrolipoamide dehydrogenase
13_2_20cm_scaffold_3123_19
unknown

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16439..16858
DNA (420bp) protein (140aa)

This feature has no annotations

13_2_20cm_scaffold_3123_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16855..17565
DNA (711bp) protein (237aa)
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Octanoyltransferase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=LIPB_GLOVI
Octanoyltransferase
13_2_20cm_scaffold_3123_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17571..19892
DNA (2322bp) protein (774aa)
penicillin amidase (EC:3.5.1.11)
Penicillin amidase {ECO:0000313|EMBL:ABJ86920.1}; EC=3.5.1.11 {ECO:0000313|EMBL:ABJ86920.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacter
Penicillin amidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TV0_SOLUE rbh
13_2_20cm_scaffold_3123_22

Not on your lists

19910..20047
DNA (138bp) protein (46aa)
Molybdopterin binding protein n=1 Tax=uncultured bacterium F25-01 RepID=I3VIH3_9BACT
Molybdopterin binding protein {ECO:0000313|EMBL:AFK79179.1}; TaxID=1191433 species="Bacteria; environmental samples.;" source="uncultured bacterium F25-01.;"
Displaying 22 items

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