ggKbase home page

13_2_20cm_scaffold_31869

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_31869_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1..663
DNA (663bp) protein (221aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
13_2_20cm_scaffold_31869_2
unknown

Not on your lists

comp(917..1033)
DNA (117bp) protein (39aa)

This feature has no annotations

13_2_20cm_scaffold_31869_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

1073..2356
DNA (1284bp) protein (428aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Cytochrome c oxidase subunit I id=1881839 bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidase, subunit 1
13_2_20cm_scaffold_31869_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2377..3054
DNA (678bp) protein (226aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome oxidase subunit III n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3081F
ctaE; putative transmembrane cytochrome oxidase subunit
13_2_20cm_scaffold_31869_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3067..3342
DNA (276bp) protein (92aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_2_20cm_scaffold_31869_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3381..4187
DNA (807bp) protein (269aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protoheme IX farnesyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ28_SINAD
protoheme IX farnesyltransferase
13_2_20cm_scaffold_31869_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4225..4413
DNA (189bp) protein (63aa)
id=14626057 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_31869_8
unknown

Not on your lists

4410..4610
DNA (201bp) protein (67aa)

This feature has no annotations

13_2_20cm_scaffold_31869_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4706..5095
DNA (390bp) protein (130aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
hypothetical protein
13_2_20cm_scaffold_31869_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5068..5562
DNA (495bp) protein (165aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
Chlorite dismutase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP0_9BACT
13_2_20cm_scaffold_31869_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5725..6696
DNA (972bp) protein (324aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C799_SPHTD
13_2_20cm_scaffold_31869_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6686..7606
DNA (921bp) protein (307aa)
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_2_20cm_scaffold_31869_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7597..8703
DNA (1107bp) protein (369aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y491_SORCE
hypothetical protein
13_2_20cm_scaffold_31869_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8737..10722)
DNA (1986bp) protein (662aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
transketolase
13_2_20cm_scaffold_31869_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10731..11048)
DNA (318bp) protein (106aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_31869_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11126..13933
DNA (2808bp) protein (936aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036F4AA4
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TonB-dependent receptor
13_2_20cm_scaffold_31869_17
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13961..14698
DNA (738bp) protein (246aa)
quinoprotein ethanol dehydrogenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000380528D
putative quinoprotein alcohol dehydrogenase
Putative quinoprotein alcohol dehydrogenase {ECO:0000313|EMBL:BAO89341.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source
13_2_20cm_scaffold_31869_18
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14844..15560
DNA (717bp) protein (239aa)
exaA; quinoprotein ethanol dehydrogenase ExaA (EC:1.1.2.8) Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
Pyrrolo-quinoline quinone n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46Q20_CUPPJ
Pyrrolo-quinoline quinone
13_2_20cm_scaffold_31869_19

Not on your lists

15969..17123
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY96666.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
outer membrane channel
13_2_20cm_scaffold_31869_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17276..17491)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_2_20cm_scaffold_31869_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17913..18182
DNA (270bp) protein (90aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_31869_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18260..18586
DNA (327bp) protein (109aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_31869_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18604..19227
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 23 items

View Taxonomy