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13_2_20cm_scaffold_3519

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3519_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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125..691
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BI01_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07954.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
13_2_20cm_scaffold_3519_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(803..1543)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSZ1_PUSST
Uncharacterized protein {ECO:0000313|EMBL:KJB94414.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
13_2_20cm_scaffold_3519_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1702..3345)
DNA (1644bp) protein (548aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=566679 species="Bacteria; Proteobac
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAW6_9BRAD
13_2_20cm_scaffold_3519_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3505..3669)
DNA (165bp) protein (55aa)
Flp/Fap pilin component n=2 Tax=Rhodopseudomonas palustris RepID=Q6NBC3_RHOPA
Flp/Fap pilin protein
Flp/Fap pilin component {ECO:0000313|EMBL:CAE26349.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_2_20cm_scaffold_3519_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3815..4693)
DNA (879bp) protein (293aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRP5_NITHX
extracellular solute-binding protein
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:ABE61102.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
13_2_20cm_scaffold_3519_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4884..5483)
DNA (600bp) protein (200aa)
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone n=1 Tax=Rhodovulum sp. PH10 RepID=J6LBE3_9RHOB
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone {ECO:0000313|EMBL:EJW10653.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
electron transport protein SCO1/SenC
13_2_20cm_scaffold_3519_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5512..5676)
DNA (165bp) protein (55aa)
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46751.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
13_2_20cm_scaffold_3519_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5829..6473)
DNA (645bp) protein (215aa)
Protein TonB n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IY04_RHOCS
tonB; protein TonB
Protein TonB {ECO:0000313|EMBL:ACJ01178.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum
13_2_20cm_scaffold_3519_9
unknown

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comp(6470..6568)
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_scaffold_3519_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6565..6990)
DNA (426bp) protein (142aa)
TonB system transport protein ExbD type-1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INA1_XANP2
TonB system transport protein ExbD type-1
TonB system transport protein ExbD type-1 {ECO:0000313|EMBL:ABS69495.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xan
13_2_20cm_scaffold_3519_11
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7025..7612)
DNA (588bp) protein (196aa)
Biopolymer transport protein ExbB uptake of enterobactin, tonB-dependent uptake of B colicins n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXI2_PHAMO
Biopolymer transport protein ExbB uptake of enterobactin, tonB-dependent uptake of B colicins {ECO:0000313|EMBL:CCG43070.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
hypothetical protein
13_2_20cm_scaffold_3519_12
unknown

Not on your lists

comp(7575..7802)
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_scaffold_3519_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8228..9412)
DNA (1185bp) protein (395aa)
Flavin-dependent oxidoreductase, methylene-tetrahydromethanopterin reductase n=1 Tax=Rhizobium sp. CF142 RepID=J2ATK8_9RHIZ rbh
monooxygenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
probable monooxygenase protein
13_2_20cm_scaffold_3519_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9409..10200)
DNA (792bp) protein (264aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ01_PSEUX
alpha/beta hydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
alpha/beta hydrolase
13_2_20cm_scaffold_3519_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10259..10702)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y8R5_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_2_20cm_scaffold_3519_16
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(11257..12540)
DNA (1284bp) protein (428aa)
MFS transporter n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MAG2_9BACL
major facilitator superfamily protein Tax=RBG_16_Aminicenantes_63_16_curated
major facilitator superfamily MFS_1
13_2_20cm_scaffold_3519_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..12891)
DNA (243bp) protein (81aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HLY3_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:ETX07490.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
alpha/beta hydrolase
Displaying 17 items

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