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13_2_20cm_scaffold_3575

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3575_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1018)
DNA (1017bp) protein (339aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
ketol-acid reductoisomerase n=1 Tax=Caldimonas manganoxidans RepID=UPI000377C464
13_2_20cm_scaffold_3575_2
unknown

Not on your lists

comp(1023..1568)
DNA (546bp) protein (182aa)

This feature has no annotations

13_2_20cm_scaffold_3575_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1590..2084)
DNA (495bp) protein (165aa)
acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Acetolactate synthase, small subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM09_AZOSU
acetolactate synthase small subunit
13_2_20cm_scaffold_3575_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2081..2644)
DNA (564bp) protein (188aa)
acetolactate synthase, large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
acetolactate synthase large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZFI1_9PROT
13_2_20cm_scaffold_3575_5
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2731..2916
DNA (186bp) protein (62aa)
Tax=RBG_16_Gallionellales_56_9_curated
13_2_20cm_scaffold_3575_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3217..3519
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Streptomyces sp. Wigar10 RepID=UPI0003761E38
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_2_20cm_scaffold_3575_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3847..4416
DNA (570bp) protein (190aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM11_AZOSU
DNA-directed RNA polymerase specialized sigma subunit, sigma24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
DNA-directed RNA polymerase specialized sigma subunit, sigma24
13_2_20cm_scaffold_3575_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4413..4835
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000380C5F9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
COG: DNA-directed RNA polymerase specialized sigma subunit
13_2_20cm_scaffold_3575_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4835..5266
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM13_AZOSU
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_2_20cm_scaffold_3575_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5272..5658
DNA (387bp) protein (129aa)
Putative transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHD8_THIDA
putative transmembrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
transmembrane protein
13_2_20cm_scaffold_3575_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5655..6743)
DNA (1089bp) protein (363aa)
Permease YjgP/YjgQ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJE8_9PROT
permease YjgP/YjgQ Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
permease YjgP/YjgQ
13_2_20cm_scaffold_3575_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6747..7823)
DNA (1077bp) protein (359aa)
Putative permease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM16_AZOSU rbh
putative permease; K07091 lipopolysaccharide export system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative permease
13_2_20cm_scaffold_3575_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7838..9250
DNA (1413bp) protein (471aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Probable cytosol aminopeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI47_9PROT
leucyl aminopeptidase
13_2_20cm_scaffold_3575_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9247..9684
DNA (438bp) protein (146aa)
DNA polymerase III subunit chi (EC:2.7.7.7); K02339 DNA polymerase III subunit chi [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
DNA polymerase III subunit chi (EC:2.7.7.7)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B0C38
13_2_20cm_scaffold_3575_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9677..10000
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_2_20cm_scaffold_3575_16
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10001..12013
DNA (2013bp) protein (671aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CNF1_9BURK
Displaying 16 items

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