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13_2_20cm_scaffold_358

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_358_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..684)
DNA (684bp) protein (228aa)
Predicted glutamine amidotransferases Tax=GWA2_Rokubacteria_73_35_curated
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase C26
13_2_20cm_scaffold_358_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(681..1178)
DNA (498bp) protein (166aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_358_3
unknown

Not on your lists

comp(1196..1738)
DNA (543bp) protein (181aa)

This feature has no annotations

13_2_20cm_scaffold_358_4
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1761..3290)
DNA (1530bp) protein (510aa)
Iron complex outer membrane receptor protein; K02014 iron complex outermembrane recepter protein Tax=GWA2_Ignavibacteria_54_16_curated
Iron complex outer membrane receptor protein; K02014 iron complex outermembrane recepter protein id=7717603 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
TonB-dependent receptor plug
13_2_20cm_scaffold_358_5
unknown

Not on your lists

comp(3275..3520)
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_358_6
unknown

Not on your lists

3867..3974
DNA (108bp) protein (36aa)

This feature has no annotations

13_2_20cm_scaffold_358_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4050..4556
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_358_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4560..5249
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE85_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72077.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_2_20cm_scaffold_358_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5539..5934
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWF6_RUBXD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_358_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5947..7290
DNA (1344bp) protein (448aa)
Proton/peptide symporter family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D947_MYXXD rbh
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
proton/peptide symporter family protein
13_2_20cm_scaffold_358_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..8355)
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q301_9FIRM
oligopeptide transport ATP-binding protein AppF-like Tax=RBG_16_Betaproteobacteria_66_20_curated
oligopeptide/dipeptide ABC transporter, ATPase subunit
13_2_20cm_scaffold_358_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8352..9347)
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Halanaerobium RepID=E3DNP1_HALPG id=5224083 bin=16ft_combo_ws3_JS1 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
oligopeptide/dipeptide ABC transporter, ATPase subunit
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90217.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_358_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9359..10291)
DNA (933bp) protein (311aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE48_DESAR
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_358_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10288..11301)
DNA (1014bp) protein (338aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S5I0_PROA2
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_358_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11302..12984)
DNA (1683bp) protein (561aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, periplasmic subunit
13_2_20cm_scaffold_358_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12986..13597)
DNA (612bp) protein (204aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lipoate-protein ligase A n=2 Tax=Singulisphaera acidiphila RepID=L0DKT7_SINAD
biotin/lipoate A/B protein ligase
13_2_20cm_scaffold_358_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13683..16496)
DNA (2814bp) protein (938aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GJB5_9CYAN
Glycine dehydrogenase [decarboxylating]
13_2_20cm_scaffold_358_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16567..17247)
DNA (681bp) protein (227aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
metal-dependent hydrolase id=15192273 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
13_2_20cm_scaffold_358_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17244..17633)
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvH; glycine cleavage system H protein
13_2_20cm_scaffold_358_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17645..18688)
DNA (1044bp) protein (348aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
13_2_20cm_scaffold_358_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18710..19318)
DNA (609bp) protein (203aa)
tdk; thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thymidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F0_GEMAT
Thymidine kinase
13_2_20cm_scaffold_358_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19492..19782
DNA (291bp) protein (97aa)
DNA-binding protein HU n=3 Tax=Anaerostipes RepID=B0MEU3_9FIRM
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-binding protein HBsu
13_2_20cm_scaffold_358_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19789..20991)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F1_GEMAT
DbpA RNA-binding domain protein
DbpA RNA-binding domain protein {ECO:0000313|EMBL:AHG90226.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_358_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21031..21426
DNA (396bp) protein (132aa)
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S58 DmpA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL16_RHOMR
peptidase S58 DmpA
Displaying 24 items

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