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13_2_20cm_scaffold_3581

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3581_1
unknown

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3..101
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_scaffold_3581_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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98..781
DNA (684bp) protein (228aa)
Putative phosphotransferase system enzyme IIC component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G2_GEMAT
phosphotransferase system PTS sorbose-specific IIC subunit
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:AHG90661.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3581_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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778..1512
DNA (735bp) protein (245aa)
Phosphotransferase system enzyme IID component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G3_GEMAT
phosphotransferase system enzyme IID component; K02796 PTS system, mannose-specific IID component Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PTS system mannose/fructose/sorbose family IID component
13_2_20cm_scaffold_3581_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1503..1805
DNA (303bp) protein (101aa)
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein id=7200581 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
phosphocarrier, HPr family
13_2_20cm_scaffold_3581_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1802..3613
DNA (1812bp) protein (604aa)
ptsI; phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT rbh
13_2_20cm_scaffold_3581_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3626..4081
DNA (456bp) protein (152aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
13_2_20cm_scaffold_3581_7
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4078..4530
DNA (453bp) protein (151aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Saccharomonospora glauca K62 RepID=I1D168_9PSEU
metK: methionine adenosyltransferase
13_2_20cm_scaffold_3581_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4523..4753
DNA (231bp) protein (77aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HDR3_PSEAC
13_2_20cm_scaffold_3581_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4746..6095
DNA (1350bp) protein (450aa)
Adenosylhomocysteinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FF04_9DELT
adenosylhomocysteinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
adenosylhomocysteinase
13_2_20cm_scaffold_3581_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6095..6616
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF151
13_2_20cm_scaffold_3581_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6666..7592
DNA (927bp) protein (309aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_3581_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7744..8556
DNA (813bp) protein (271aa)
ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G9_GEMAT
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-type transporter, periplasmic subunit
13_2_20cm_scaffold_3581_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8553..9494
DNA (942bp) protein (314aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Streptomyces sp. SM8 RepID=K1VDQ9_9ACTO
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
iron ABC transporter
13_2_20cm_scaffold_3581_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9491..10303
DNA (813bp) protein (271aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
13_2_20cm_scaffold_3581_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10300..11766
DNA (1467bp) protein (489aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3581_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11709..12074
DNA (366bp) protein (122aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_3581_17
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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12064..12987
DNA (924bp) protein (308aa)
Periplasmic binding protein n=2 Tax=Chloroflexus RepID=A9WHK1_CHLAA
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABY36327.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorofl
13_2_20cm_scaffold_3581_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13035..14657
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF9_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_3581_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14716..14949
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF9_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_3581_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14946..15731
DNA (786bp) protein (262aa)
DNA repair protein RecO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H2_GEMAT
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;"
13_2_20cm_scaffold_3581_21
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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15710..17581
DNA (1872bp) protein (624aa)
Selenocysteine-specific elongation factor n=2 Tax=Moorella thermoacetica RepID=SELB_MOOTH
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67714.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
selenocysteine-specific translation elongation factor SelB
13_2_20cm_scaffold_3581_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17690..18133
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_3581_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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18219..20834
DNA (2616bp) protein (872aa)
Chaperone ClpB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H4_GEMAT
clpB; chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T
13_2_20cm_scaffold_3581_24
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20863..21048
DNA (186bp) protein (62aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; A
tRNA-specific adenosine-34 deaminase (EC:3.5.4.-)
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3T2_9RHIZ
Displaying 24 items

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