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13_2_20cm_scaffold_3615

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3615_1
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3..1181
DNA (1179bp) protein (393aa)
AMP-binding enzyme family protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L1W6_NOCAA
AMP-binding enzyme family protein
AMP-binding enzyme family protein {ECO:0000313|EMBL:AFR06751.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strai
13_2_20cm_scaffold_3615_2
R_OP11_Gottesmanbacteria_46_14, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1186..1689)
DNA (504bp) protein (168aa)
hypothetical protein; K09979 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_46_14_curated
hypothetical protein; K09979 hypothetical protein id=15187751 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
13_2_20cm_scaffold_3615_3
unknown

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comp(1695..1910)
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_3615_4
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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2053..3567
DNA (1515bp) protein (505aa)
benzoate-CoA ligase (EC:6.2.1.25)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00037ED189
4-hydroxybenzoate--CoA ligase {ECO:0000313|EMBL:KGQ21102.1}; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
13_2_20cm_scaffold_3615_5
unknown

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3724..4446
DNA (723bp) protein (241aa)

This feature has no annotations

13_2_20cm_scaffold_3615_6
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4547..5830
DNA (1284bp) protein (428aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYK4_9FIRM rbh
13_2_20cm_scaffold_3615_7
unknown

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5827..6612
DNA (786bp) protein (262aa)

This feature has no annotations

13_2_20cm_scaffold_3615_8
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

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6609..7151
DNA (543bp) protein (181aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWM7_SULAA
13_2_20cm_scaffold_3615_9
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7144..8523
DNA (1380bp) protein (460aa)
Putative Isopropylmalate/citramalate/homocitrate synthase n=1 Tax=mine drainage metagenome RepID=E6Q4U0_9ZZZZ rbh
2-isopropylmalate synthase {ECO:0000313|EMBL:KJR44661.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.
aksA; trans-homoaconitate synthase
13_2_20cm_scaffold_3615_10
unknown

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8530..9033
DNA (504bp) protein (168aa)

This feature has no annotations

13_2_20cm_scaffold_3615_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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9065..10051
DNA (987bp) protein (329aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] Tax=GWC2_RIF_CHLX_73_18_curated
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) id=4899347 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_2_20cm_scaffold_3615_12
Phytophthora ramorum, Phytophthora, Peronosporales, Eukaryota

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10095..11750
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Phytophthora ramorum RepID=H3GVS3_PHYRM
Uncharacterized protein {ECO:0000313|EnsemblProtists:Phyra81496}; TaxID=164328 species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora ramorum (Sudden oak de
hypothetical protein
13_2_20cm_scaffold_3615_13
unknown

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comp(11582..11932)
DNA (351bp) protein (117aa)

This feature has no annotations

13_2_20cm_scaffold_3615_14
unknown

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11975..12370
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_scaffold_3615_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12392..13363
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003709F5B
N-acetyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acetyltransferase
13_2_20cm_scaffold_3615_16
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

13356..14240
DNA (885bp) protein (295aa)
Chaperone DnaJ domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHH4_THET1
chaperone DnaJ domain-containing protein
Chaperone DnaJ domain protein {ECO:0000313|EMBL:ACZ43195.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_2_20cm_scaffold_3615_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14216..15772
DNA (1557bp) protein (519aa)
Spermine synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C301_SPHTD
spermine synthase
Spermine synthase {ECO:0000313|EMBL:ACZ38618.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sph
13_2_20cm_scaffold_3615_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15769..16233)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7S6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95900.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
Displaying 18 items

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