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13_2_20cm_scaffold_347

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_347_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..1102)
DNA (1101bp) protein (367aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type II secretion system protein E id=4311467 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type II secretion system protein E
13_2_20cm_scaffold_347_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1112..1648)
DNA (537bp) protein (179aa)
Predicted phosphatase id=4311466 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase Tax=GWA2_Rokubacteria_73_35_curated
Appr-1-p processing protein
13_2_20cm_scaffold_347_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1651..2457)
DNA (807bp) protein (269aa)
protein mazG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protein mazG id=4311465 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MazG family protein
13_2_20cm_scaffold_347_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2653..2874
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4311464 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_347_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2855..3499)
DNA (645bp) protein (215aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4311463 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_347_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3682..4146
DNA (465bp) protein (155aa)
Heat shock protein Hsp20 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Heat shock protein Hsp20 id=4311462 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HspC2 heat shock protein
13_2_20cm_scaffold_347_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4216..6135
DNA (1920bp) protein (640aa)
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) id=14625666 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
13_2_20cm_scaffold_347_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6145..7041
DNA (897bp) protein (299aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=3544317 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Zn finger domain-containing DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ Tax=GWA2_Rokubacteria_73_35_curated
DnaJ-class molecular chaperone with C-terminal Zn finger domain
13_2_20cm_scaffold_347_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7038..7433
DNA (396bp) protein (132aa)
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator id=3544313 bin=GWA2_Methylomirabilis_73_35 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
13_2_20cm_scaffold_347_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7474..9861
DNA (2388bp) protein (796aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) id=14625663 bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53)
13_2_20cm_scaffold_347_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9928..10611
DNA (684bp) protein (228aa)
Lytic transglycosylase, catalytic Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase, catalytic id=3544309 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Lytic transglycosylase, catalytic
13_2_20cm_scaffold_347_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10618..11244)
DNA (627bp) protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625661 bin=bin7_NC10_sister species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_347_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11703..12152
DNA (450bp) protein (150aa)
Type IV pilus assembly protein tapB n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMG4_9BACT
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
tapB; type IV pilus assembly protein tapB
13_2_20cm_scaffold_347_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12233..12889
DNA (657bp) protein (219aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=14625671 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
type II secretion system protein E
13_2_20cm_scaffold_347_15
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12905..13306)
DNA (402bp) protein (134aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0J7_DESTA
Fis family two component sigma-54 specific transcriptional regulator; K02481 two-component system, NtrC family, response regulator Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_2_20cm_scaffold_347_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13363..15144)
DNA (1782bp) protein (594aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Acetolactate synthase large subunit id=4253877 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
thiamine pyrophosphate protein central region
13_2_20cm_scaffold_347_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15218..16798)
DNA (1581bp) protein (527aa)
transcriptional regulator id=14625658 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator Tax=CSP1_6_Rokubacteria
transcriptional regulator
13_2_20cm_scaffold_347_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16809..17195
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4953988 bin=GWC2_Methylomirabilis_70_16 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_347_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17211..18626
DNA (1416bp) protein (472aa)
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component system response regulator, sigma54-specific id=4571215 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two component system response regulator, sigma54-specific
13_2_20cm_scaffold_347_20
unknown

Not on your lists

18917..19042
DNA (126bp) protein (42aa)

This feature has no annotations

13_2_20cm_scaffold_347_21
unknown

Not on your lists

19057..19143
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 21 items

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