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13_2_20cm_scaffold_3885

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3885_1
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..579)
DNA (579bp) protein (193aa)
hypothetical protein Tax=RBG_13_Bacteroidetes_42_15_curated
Uncharacterized protein id=2958467 bin=GWF1_Spirochaetes_51_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
hypothetical protein
13_2_20cm_scaffold_3885_2

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849..1658
DNA (810bp) protein (270aa)
Acyl-CoA dehydrogenase (Short-chain specific) (ACADM, acd) {ECO:0000313|EMBL:AIF11707.1}; EC=1.3.8.7 {ECO:0000313|EMBL:AIF11707.1};; TaxID=1456183 species="Archaea; Thaumarchaeota; environmental sampl
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N886_9ARCH
13_2_20cm_scaffold_3885_3
unknown

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1903..2343
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_scaffold_3885_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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2403..2909
DNA (507bp) protein (169aa)
Nudix 7..137 id=1247471 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Nudix 7..137 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_2_20cm_scaffold_3885_5
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2935..3756)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00037A50C9
alkA; DNA-3-methyladenine glycosylase II
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AAM06578.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_2_20cm_scaffold_3885_6
unknown

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4062..4742
DNA (681bp) protein (227aa)

This feature has no annotations

13_2_20cm_scaffold_3885_7
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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4805..5566
DNA (762bp) protein (254aa)
Methyltransferase type 11 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5US96_ROSS1
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Euryarchaeota_62_10_curated
type 11 methyltransferase
13_2_20cm_scaffold_3885_8

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comp(5563..6549)
DNA (987bp) protein (329aa)
Putative Aldo/keto reductase family protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141K23 RepID=B3T5Q4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKN16340.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aldo/keto reductase
13_2_20cm_scaffold_3885_9
unknown

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6700..7248
DNA (549bp) protein (183aa)

This feature has no annotations

13_2_20cm_scaffold_3885_10
unknown

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7245..7493
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_scaffold_3885_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7486..7839
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BB8_METBF
Transcriptional regulator, HxlR family
Uncharacterized protein {ECO:0000313|EMBL:AAZ70824.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ba
13_2_20cm_scaffold_3885_12

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comp(7841..9352)
DNA (1512bp) protein (504aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] id=1250805 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Uncharacterized protein {ECO:0000313|EMBL:EQB63668.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
13_2_20cm_scaffold_3885_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(9428..9904)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1J6Y5_STRMM
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
ADP-ribose pyrophosphatase
13_2_20cm_scaffold_3885_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(9942..10292)
DNA (351bp) protein (117aa)
Nascent polypeptide-associated complex protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=NAC_METMA
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
nascent polypeptide-associated complex protein
13_2_20cm_scaffold_3885_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(10339..10824)
DNA (486bp) protein (162aa)
PUA domain containing protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGA6_ARCPA
PUA domain containing protein; K07398 conserved protein with predicted RNA binding PUA domain Tax=RBG_16_Bathyarchaeota_48_13_curated
archaeosine tRNA-ribosyltransferase
13_2_20cm_scaffold_3885_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10952..11401
DNA (450bp) protein (150aa)
Predicted transcription factor (Eukaryotic MBF1 related) n=4 Tax=Methanobrevibacter RepID=A5UK32_METS3
transcriptional regulator, xre family; K03627 putative transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription factor ( MBF1 related)
Displaying 16 items

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