ggKbase home page

13_2_20cm_scaffold_4004

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4004_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..720
DNA (720bp) protein (240aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=1187851 species="Bacteria; Proteobacteria; Alpha
Acetylglutamate kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBZ6_9RHOB
acetylglutamate kinase
13_2_20cm_scaffold_4004_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(950..1945)
DNA (996bp) protein (332aa)
aldo/keto reductase (EC:1.1.1.65)
Aldo/keto reductase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IZK2_NOSP7 rbh
putative aldo/keto reductase Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_2_20cm_scaffold_4004_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2117..3805
DNA (1689bp) protein (563aa)
Bll2849 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RC3_BRADU
hypothetical protein
Bll2849 protein {ECO:0000313|EMBL:BAC48114.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_2_20cm_scaffold_4004_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3893..5506)
DNA (1614bp) protein (538aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H2N3_9BRAD
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_2_20cm_scaffold_4004_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5656..6675)
DNA (1020bp) protein (340aa)
3-hydroxyethyl bacteriochlorophyllide a dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6R6_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46847.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_2_20cm_scaffold_4004_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6729..7754)
DNA (1026bp) protein (342aa)
Putative esterase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WCZ3_9BRAD
Esterase {ECO:0000313|EMBL:ETR77425.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_2_20cm_scaffold_4004_7
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7801..8526)
DNA (726bp) protein (242aa)
Putative heme iron utilization protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WDY6_9BRAD
Putative heme iron utilization protein {ECO:0000313|EMBL:EJN10885.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhiz
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
13_2_20cm_scaffold_4004_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8726..9427
DNA (702bp) protein (234aa)
DNA-binding response regulator ChvI n=1 Tax=Rhodovulum sp. PH10 RepID=J6UF56_9RHOB rbh
DNA-binding response regulator ChvI {ECO:0000313|EMBL:EJW12306.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
two component transcriptional regulator
13_2_20cm_scaffold_4004_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10029..11708
DNA (1680bp) protein (560aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Sensor histidine kinase ChvG n=1 Tax=Rhodovulum sp. PH10 RepID=J6J9B5_9RHOB
periplasmic sensor signal transduction histidine kinase
13_2_20cm_scaffold_4004_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11708..12169
DNA (462bp) protein (154aa)
HPr kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LHB5_9RHOB
HPr kinase {ECO:0000313|EMBL:EJW12303.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
HPr kinase
13_2_20cm_scaffold_4004_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12369..12770
DNA (402bp) protein (134aa)
PTS system permease (IIAMan), nitrogen regulatory IIA protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PPX7_9RHOB
PTS system permease (IIAMan), nitrogen regulatory IIA protein {ECO:0000313|EMBL:EJW12302.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rh
PTS system fructose subfamily IIA component
13_2_20cm_scaffold_4004_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12767..13096
DNA (330bp) protein (110aa)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ96_XANP2
Serine kinase {ECO:0000313|EMBL:KJC57238.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299
phosphotransferase system, phosphocarrier protein HPr
13_2_20cm_scaffold_4004_13
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13119..13472)
DNA (354bp) protein (118aa)
Putative uracil-DNA glycosylase n=1 Tax=Rhodovulum sp. PH10 RepID=J6JCP6_9RHOB
Putative uracil-DNA glycosylase {ECO:0000313|EMBL:EJW12975.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum
putative uracil-DNA glycosylase
13_2_20cm_scaffold_4004_14
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13469..13693)
DNA (225bp) protein (75aa)
uracil DNA glycosylase (EC:2.7.7.7)
Uracil-DNA glycosylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H1Z2_9PROT
Uracil-DNA glycosylase {ECO:0000313|EMBL:EKV32285.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillu
13_2_20cm_scaffold_4004_15
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13901..15337
DNA (1437bp) protein (479aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ILJ5_AZOC5 rbh
S-adenosyl-L-homocysteine hydrolase
13_2_20cm_scaffold_4004_16
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15584..16900
DNA (1317bp) protein (439aa)
Adenosine/AMP deaminase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) PF6_XANP2">RepID=A7IPF6_XANP2 rbh
adenosine/AMP deaminase
Adenosine/AMP deaminase {ECO:0000313|EMBL:ABS69902.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xa
13_2_20cm_scaffold_4004_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16884..18509)
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VI19_RHOPX rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU41915.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
Displaying 17 items

View Taxonomy