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13_2_20cm_scaffold_4303

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4303_1
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(2..418)
DNA (417bp) protein (139aa)
30S ribosomal protein S4e n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=RS4E_IGNH4
30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospita
13_2_20cm_scaffold_4303_2

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comp(422..637)
DNA (216bp) protein (72aa)
50S ribosomal protein L24P n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A0J2_FERFK
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L24p/L26e, archaeal/eukaryotic
13_2_20cm_scaffold_4303_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(907..1194)
DNA (288bp) protein (96aa)
Putative ribosomal protein L14p/L23e n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T594_9ZZZZ
rpl14p; 50S ribosomal protein L14p Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl14p; 50S ribosomal protein L14p
13_2_20cm_scaffold_4303_4
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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comp(1197..1532)
DNA (336bp) protein (112aa)
30S ribosomal protein S17P n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMD9_ACIS0
archaeal ribosomal protein S17P
Archaeal ribosomal protein S17P {ECO:0000313|EMBL:AGB04976.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
13_2_20cm_scaffold_4303_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(1526..1807)
DNA (282bp) protein (94aa)
rnp1; ribonuclease P, component 1 (EC:3.1.26.5); K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=CG_Aenigma_01
Ribonuclease P protein component 1 n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDC1_THEC1
ribonuclease P, Rpp29
13_2_20cm_scaffold_4303_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(1811..2023)
DNA (213bp) protein (71aa)
50S ribosomal protein L29P n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SKB5_9EURY
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Bathyarchaeota_38_9_curated
ribosomal protein L29P Rpl29p
13_2_20cm_scaffold_4303_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2001..2708)
DNA (708bp) protein (236aa)
Ribosomal protein S3, eukaryotic/archaeal type (Fragment) n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TAB9_9ARCH
rps3p; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S3
13_2_20cm_scaffold_4303_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2713..3060)
DNA (348bp) protein (116aa)
50S ribosomal protein L22P n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL22_METKA
50S ribosomal protein L22 Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl22p; 50S ribosomal protein L22
13_2_20cm_scaffold_4303_9
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3349..4152
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6V2V8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAL80226.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATC
13_2_20cm_scaffold_4303_10
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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4289..4531
DNA (243bp) protein (81aa)
Putative circadian clock protein, KaiC n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0H8_THEPD
putative circadian clock protein, KaiC
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ABL78958.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pe
13_2_20cm_scaffold_4303_11
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4497..4958
DNA (462bp) protein (154aa)
UPI0003D1C594 related cluster n=1 Tax=unknown RepID=UPI0003D1C594
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:ETA67929.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; M
13_2_20cm_scaffold_4303_12
unknown

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4963..5424
DNA (462bp) protein (154aa)

This feature has no annotations

13_2_20cm_scaffold_4303_13
RBG_16_Archaea_50_20_curated, Archaea

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5848..7086
DNA (1239bp) protein (413aa)
ORC1-type DNA replication protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BL96_HYPBU
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 Tax=RBG_16_Archaea_50_20_curated
cdc6; cell division control protein 6
13_2_20cm_scaffold_4303_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7094..7399
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / VKM B-2471 / 345-15) RepID=D9Q342_ACIS3
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_2_20cm_scaffold_4303_15
unknown

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7408..7599
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_4303_16
unknown

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comp(7762..8295)
DNA (534bp) protein (178aa)

This feature has no annotations

13_2_20cm_scaffold_4303_17
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

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comp(8452..8844)
DNA (393bp) protein (131aa)
DNA polymerase, beta domain protein region n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0W2_THEPD
nucleotidyltransferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
DNA polymerase subunit beta
13_2_20cm_scaffold_4303_18
unknown

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9018..9308
DNA (291bp) protein (97aa)

This feature has no annotations

13_2_20cm_scaffold_4303_19
Methanomassiliicoccus luminyensis, Methanomassiliicoccus, Methanomicrobia, Euryarchaeota, Archaea

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9338..10000
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036369AA
13_2_20cm_scaffold_4303_20
unknown

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10105..10335
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 20 items

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