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13_2_20cm_scaffold_438

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_438_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_scaffold_438_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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640..1359
DNA (720bp) protein (240aa)
Sugar-specific transcriptional regulator TrmB family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFH4_ACIB4
transcriptional regulator, TrmB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcriptional regulator, TrmB
13_2_20cm_scaffold_438_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1359..2576
DNA (1218bp) protein (406aa)
Geranylgeranyl reductase family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8U4_9EURY
geranylgeranyl reductase family protein Tax=RBG_16_Euryarchaeota_68_12_curated
geranylgeranyl reductase family protein
13_2_20cm_scaffold_438_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2573..3796)
DNA (1224bp) protein (408aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDA9_ACIB4 rbh
RNA-metabolising metallo-beta-lactamase; K07577 putative mRNA 3-end processing factor Tax=RBG_16_Euryarchaeota_68_13_curated
RNA-metabolising metallo-beta-lactamase
13_2_20cm_scaffold_438_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3824..4921)
DNA (1098bp) protein (366aa)
2,3-di-O-geranylgeranylglyceryl phosphate reductase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CW88_METMJ rbh
geranylgeranyl reductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
geranylgeranyl reductase
13_2_20cm_scaffold_438_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(4930..5901)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360C7AE
Geranylgeranyl pyrophosphate synthase Tax=RBG_16_Euryarchaeota_68_13_curated
Geranylgeranyl pyrophosphate synthase
13_2_20cm_scaffold_438_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6040..7350)
DNA (1311bp) protein (437aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_scaffold_438_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7678..8832
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
putative signal transduction protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_scaffold_438_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8878..9288
DNA (411bp) protein (137aa)
Thioredoxin 1 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9C7_9ARCH
trxA; thioredoxin; K03671 thioredoxin 1 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
thioredoxin 1
13_2_20cm_scaffold_438_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9302..10135)
DNA (834bp) protein (278aa)
Iron-sulfur cluster assembly/repair protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWF2_SYNAS
iron-sulfur cluster assembly/repair protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
iron-sulfur cluster assembly/repair protein
13_2_20cm_scaffold_438_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10233..10967)
DNA (735bp) protein (245aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_438_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11171..11464)
DNA (294bp) protein (98aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_2_20cm_scaffold_438_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11559..13061
DNA (1503bp) protein (501aa)
malate dehydrogenase (EC:1.1.1.40); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036E07C3
NADP-dependent malic enzyme
13_2_20cm_scaffold_438_14
unknown

Not on your lists

13270..13581
DNA (312bp) protein (104aa)

This feature has no annotations

13_2_20cm_scaffold_438_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

13625..13837
DNA (213bp) protein (71aa)
malate dehydrogenase (EC:1.1.1.40); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_438_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13824..14948)
DNA (1125bp) protein (375aa)
DNA polymerase IV n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FLQ3_9EURY
nucleotidyltransferase/DNA polymerase involved in DNA repair Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
nucleotidyltransferase/DNA polymerase involved in DNA repair
13_2_20cm_scaffold_438_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15022..15288)
DNA (267bp) protein (89aa)
proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003807592
13_2_20cm_scaffold_438_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15285..15905)
DNA (621bp) protein (207aa)
proton-translocating NADH-quinone oxidoreductase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003807592
NADH-ubiquinone oxidoreductase chain N
13_2_20cm_scaffold_438_19
unknown

Not on your lists

15956..16150
DNA (195bp) protein (65aa)

This feature has no annotations

13_2_20cm_scaffold_438_20
unknown

Not on your lists

16181..16501
DNA (321bp) protein (107aa)

This feature has no annotations

13_2_20cm_scaffold_438_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(16511..18043)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037678B4
NADH-ubiquinone oxidoreductase chain M Tax=RBG_16_Euryarchaeota_67_27_curated
NADH-ubiquinone oxidoreductase chain M
13_2_20cm_scaffold_438_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(18045..19613)
DNA (1569bp) protein (523aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037678B4
NADH-ubiquinone oxidoreductase chain M
13_2_20cm_scaffold_438_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(19639..19962)
DNA (324bp) protein (108aa)
nuoL; NADH-quinone oxidoreductase membrane subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=16993470 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH-ubiquinone oxidoreductase chain L Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 23 items

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