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13_2_20cm_scaffold_4397

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4397_1
unknown

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229..462
DNA (234bp) protein (78aa)

This feature has no annotations

13_2_20cm_scaffold_4397_2
RBG_16_OP11_43_9_curated, Microgenomates, Bacteria

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549..1133
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037AA44A
regulatory protein RecX; K03565 regulatory protein Tax=RBG_16_OP11_43_9_curated
regulatory protein RecX
13_2_20cm_scaffold_4397_3
unknown

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comp(1235..2002)
DNA (768bp) protein (256aa)

This feature has no annotations

13_2_20cm_scaffold_4397_4
unknown

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comp(2195..2359)
DNA (165bp) protein (55aa)

This feature has no annotations

13_2_20cm_scaffold_4397_5
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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2554..3291
DNA (738bp) protein (246aa)
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
13_2_20cm_scaffold_4397_6
RHI_OP11_45_10, Microgenomates, Bacteria

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3423..4946
DNA (1524bp) protein (508aa)
RNA binding metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OP11_45_10_curated
RNA binding metal dependent phosphohydrolase; K06950 uncharacterized protein id=5085254 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2 rbh
hypothetical protein
13_2_20cm_scaffold_4397_7
R_OP11_Gottesmanbacteria_49_10, Gottesmanbacteria, Microgenomates, Bacteria

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5172..5855
DNA (684bp) protein (228aa)
GlcNAc-PI de-N-acetylase family Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_49_10_curated
GlcNAc-PI de-N-acetylase family id=27942 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
GlcNAc-PI de-N-acetylase family
13_2_20cm_scaffold_4397_8

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6080..6925
DNA (846bp) protein (282aa)
hypothetical protein id=17777 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE03332.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ybbP; putative enzyme with DAC domain protein
13_2_20cm_scaffold_4397_9
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

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6999..7295
DNA (297bp) protein (99aa)
DNA-binding protein HU Tax=RBG_19FT_COMBO_OP11_43_10_curated
hbsU; histone-like DNA-binding protein HU; K03530 DNA-binding protein HU-beta id=5085255 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hup; DNA-binding protein HU
13_2_20cm_scaffold_4397_10
RHI_OP11_45_10, Microgenomates, Bacteria

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7344..7730
DNA (387bp) protein (129aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=RIFCSPHIGHO2_12_FULL_OP11_45_10_curated
Diacylglycerol kinase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PSY8_MEIRD
diacylglycerol kinase
13_2_20cm_scaffold_4397_11
R_OP11_43_14, Microgenomates, Bacteria

Not on your lists

7806..8504
DNA (699bp) protein (233aa)
miaA; tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_01_FULL_OP11_43_14_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=MIAA_ROSS1
13_2_20cm_scaffold_4397_12
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

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8477..8668
DNA (192bp) protein (64aa)
miaA; tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RBG_13_OP11_40_7b_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=MIAA_THERP
13_2_20cm_scaffold_4397_13
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

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8685..9752
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI000378F5EE
hypothetical protein Tax=GWB1_OP11_45_5_curated
hypothetical protein
13_2_20cm_scaffold_4397_14

Not on your lists

10464..10982
DNA (519bp) protein (173aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
hypothetical protein
Putative nucleoside diphosphate kinase id=5226384 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
13_2_20cm_scaffold_4397_15
unknown

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11113..11586
DNA (474bp) protein (158aa)

This feature has no annotations

13_2_20cm_scaffold_4397_16
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

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11693..13219
DNA (1527bp) protein (509aa)
Mg chelatase, subunit ChlI; K07391 magnesium chelatase family protein Tax=GWB1_OP11_45_5_curated
sti:Sthe_2726 Mg chelatase, subunit ChlI; K07391 magnesium chelatase family protein id=7261 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Mg chelatase subunit ChlI
13_2_20cm_scaffold_4397_17
R_OP11_Roizmanbacteria_38_10, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

13393..13653
DNA (261bp) protein (87aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_38_10_curated
Endo/excinuclease amino terminal domain protein id=2604117 bin=GWC1_CPR2_39_9 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
excinuclease ABC subunit C
13_2_20cm_scaffold_4397_18
unknown

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comp(13742..14041)
DNA (300bp) protein (100aa)

This feature has no annotations

13_2_20cm_scaffold_4397_19
RBG_16_OP11_43_9_curated, Microgenomates, Bacteria

Not on your lists

14510..15247
DNA (738bp) protein (246aa)
hypothetical protein Tax=RBG_16_OP11_43_9_curated
hypothetical protein id=86291 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
conserved exported protein of unknown function
13_2_20cm_scaffold_4397_20
R_OP11_43_14, Microgenomates, Bacteria

Not on your lists

15533..16108
DNA (576bp) protein (192aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_43_14_curated
hypothetical protein id=5085314 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Transcriptional regulator
13_2_20cm_scaffold_4397_21

Not on your lists

16195..17523
DNA (1329bp) protein (443aa)
cya:CYA_0074 secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=4764 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_4397_22
unknown

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comp(17775..18020)
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_4397_23
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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18128..18736
DNA (609bp) protein (203aa)
Strain B4064 NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIO67416.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KIO67416.1};; Strain B4065 NODE_372, whole genome shotgun sequence {ECO:0000313|EMBL:KI
Putative uncharacterized protein n=1 Tax=Enterococcus saccharolyticus 30_1 RepID=G5IP05_9ENTE
hypothetical protein
Displaying 23 items

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