ggKbase home page

13_2_20cm_scaffold_4668

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4668_1
unknown

Not on your lists

3..374
DNA (372bp) protein (124aa)

This feature has no annotations

13_2_20cm_scaffold_4668_2
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(360..1259)
DNA (900bp) protein (300aa)
LPPG domain-containing protein containing protein; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
2-phospho-L-lactate transferase (EC:2.7.1.-)
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC3_9CHLR
13_2_20cm_scaffold_4668_3
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(1268..2005)
DNA (738bp) protein (246aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
F420-0:gamma-glutamyl ligase id=4709234 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_2_20cm_scaffold_4668_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(2002..2601)
DNA (600bp) protein (200aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD2_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54168.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
13_2_20cm_scaffold_4668_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2592..3599)
DNA (1008bp) protein (336aa)
F420-dependent oxidoreductase, G6PDH family {ECO:0000313|EMBL:EFH84049.1}; EC=1.5.98.2 {ECO:0000313|EMBL:EFH84049.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales;
F420-dependent oxidoreductase, G6PDH family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUI1_9CHLR
glucose-6-phosphate dehydrogenase
13_2_20cm_scaffold_4668_6
unknown

Not on your lists

comp(3600..3812)
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_4668_7
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3844..4422
DNA (579bp) protein (193aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A919_THEAQ
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:KEF34958.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus
13_2_20cm_scaffold_4668_8
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4409..4699)
DNA (291bp) protein (97aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1345697 spe
NAD-dependent protein deacetylase n=1 Tax=Geobacillus sp. JF8 RepID=S5ZC47_9BACI
NAD-dependent deacetylase
13_2_20cm_scaffold_4668_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5220..6464
DNA (1245bp) protein (415aa)
major facilitator transporter id=14626407 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter Tax=CSP1_6_Rokubacteria
major facilitator superfamily protein
13_2_20cm_scaffold_4668_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(6328..6879)
DNA (552bp) protein (184aa)
NUDIX hydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3M4_SPHTD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACZ38841.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphae
13_2_20cm_scaffold_4668_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6890..8047)
DNA (1158bp) protein (386aa)
Diguanylate kinase (EC:2.7.7.65) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
GGDEF domain protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XS30_DESMR
diguanylate cyclase
13_2_20cm_scaffold_4668_12
unknown

Not on your lists

8775..9386
DNA (612bp) protein (204aa)

This feature has no annotations

13_2_20cm_scaffold_4668_13
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9383..10252)
DNA (870bp) protein (290aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZP2_9FIRM
13_2_20cm_scaffold_4668_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(10282..11088)
DNA (807bp) protein (269aa)
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4F9_9CHLR
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase {ECO:0000313|EMBL:EFH81389.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacterace
LmbE family protein
13_2_20cm_scaffold_4668_15
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11808..12791)
DNA (984bp) protein (328aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYD8_RUBXD
lactate dehydrogenase-like oxidoreductase Tax=RBG_13_Deltaproteobacteria_52_11b_curated
D-isomer specific 2-hydroxyacid dehydrogenase
13_2_20cm_scaffold_4668_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12788..13357)
DNA (570bp) protein (190aa)
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT6_KORVE
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABF40414.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_2_20cm_scaffold_4668_17
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(13354..14400)
DNA (1047bp) protein (349aa)
hisC3; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=planctomycete KSU-1 RepID=I3IJK3_9PLAN
histidinol-phosphate aminotransferase Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
13_2_20cm_scaffold_4668_18
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

comp(14382..15287)
DNA (906bp) protein (302aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
DNA polymerase III subunit delta' n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SAM4_9CHLR
DNA polymerase III subunit delta' {ECO:0000313|EMBL:BAL53210.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
13_2_20cm_scaffold_4668_19
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15284..15937)
DNA (654bp) protein (218aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPK5_ROSS1
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABQ88558.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ros
13_2_20cm_scaffold_4668_20
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(15918..17087)
DNA (1170bp) protein (390aa)
glycosyl transferase group 1 protein; K08256 phosphatidylinositol alpha-mannosyltransferase [EC:2.4.1.57] Tax=RBG_13_Chloroflexi_46_9_curated
hypothetical protein n=1 Tax=Bacteria RepID=UPI00036DFAD7
group 1 glycosyl transferase
13_2_20cm_scaffold_4668_21
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(17221..18099)
DNA (879bp) protein (293aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RBG_16_Chloroflexi_57_9_curated
lipid A biosynthesis acyltransferase n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034A20C1
lipid A biosynthesis acyltransferase
13_2_20cm_scaffold_4668_22
unknown

Not on your lists

comp(18103..18198)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 22 items

View Taxonomy