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13_2_20cm_scaffold_479

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_479_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..1029)
DNA (1029bp) protein (343aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.-)
Probable tRNA pseudouridine synthase D n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8C4_9EURY
conserved hypothetical protein TIGR00094 Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_479_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1034..1309)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T596_9EURY
13_2_20cm_scaffold_479_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1437..2618
DNA (1182bp) protein (394aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_479_4

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2709..2909
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377BE60
Dodecin flavoprotein {ECO:0000313|EMBL:EQD46418.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_479_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2980..3873
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00036FB645
polyketide biosynthesis dithiol-disulfide isomerase Tax=RBG_16_Euryarchaeota_67_27_curated
DsbA oxidoreductase
13_2_20cm_scaffold_479_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3841..5088)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QRP1_9PSEU
amidohydrolase Tax=RBG_16_Euryarchaeota_67_27_curated
amidohydrolase
13_2_20cm_scaffold_479_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

5351..6844
DNA (1494bp) protein (498aa)
hypothetical protein id=14632489 bin=bin9_gal15 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_2_20cm_scaffold_479_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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7066..8316
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
Hypothetical protein
13_2_20cm_scaffold_479_9
unknown

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comp(8360..8569)
DNA (210bp) protein (70aa)

This feature has no annotations

13_2_20cm_scaffold_479_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8803..9204)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037FE05A
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_16_Euryarchaeota_67_27_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_2_20cm_scaffold_479_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9207..10376)
DNA (1170bp) protein (390aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9) Tax=RBG_16_Euryarchaeota_67_27_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375FAC5
13_2_20cm_scaffold_479_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10379..11431)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780C81
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_479_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11428..12105)
DNA (678bp) protein (226aa)
XRE family transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T869_9EURY
XRE family transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
XRE family transcriptional regulator
13_2_20cm_scaffold_479_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13182..14195
DNA (1014bp) protein (338aa)
galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) (EC:2.7.7.12) Tax=RBG_16_Euryarchaeota_68_12_curated
galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) (EC:2.7.7.12)
galactose-1-phosphate uridylyltransferase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000371DAA1
13_2_20cm_scaffold_479_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14221..15597)
DNA (1377bp) protein (459aa)
glgA; glycogen synthase GlgA (EC:2.4.1.21) Tax=RBG_16_Euryarchaeota_68_12_curated
glgA; glycogen synthase GlgA (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEE0_THEPS
Displaying 15 items

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