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13_2_20cm_scaffold_4799

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4799_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..1293
DNA (1293bp) protein (431aa)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Ve
Apolipoprotein N-acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIY6_9BACT rbh
lnt; apolipoprotein N-acyltransferase
13_2_20cm_scaffold_4799_2
unknown

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comp(1388..1876)
DNA (489bp) protein (163aa)

This feature has no annotations

13_2_20cm_scaffold_4799_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1890..2489
DNA (600bp) protein (200aa)
Peptide chain release factor 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRY5_9BACT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
peptide chain release factor 2
13_2_20cm_scaffold_4799_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2643..3452
DNA (810bp) protein (270aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
Indole-3-glycerol phosphate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRY4_9BACT rbh
indole-3-glycerol phosphate synthase
13_2_20cm_scaffold_4799_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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3454..4200
DNA (747bp) protein (249aa)
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24) id=14430225 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
phosphoribosylanthranilate isomerase
13_2_20cm_scaffold_4799_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4431..5549
DNA (1119bp) protein (373aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales;
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCN1_9BACT rbh
13_2_20cm_scaffold_4799_7
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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5575..6306
DNA (732bp) protein (244aa)
Peptidase family M48 {ECO:0000313|EMBL:AEP11922.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain
13_2_20cm_scaffold_4799_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6568..6837)
DNA (270bp) protein (90aa)
Glutaredoxin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM88_9BACT
Glutaredoxin {ECO:0000313|EMBL:EEF59081.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera par
glutaredoxin
13_2_20cm_scaffold_4799_9
unknown

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comp(6834..7163)
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_scaffold_4799_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7174..7533)
DNA (360bp) protein (120aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGN1_9BACT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EEF61082.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera
cupin
13_2_20cm_scaffold_4799_11
unknown

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comp(7530..7664)
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_scaffold_4799_12
unknown

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comp(7671..8132)
DNA (462bp) protein (154aa)

This feature has no annotations

13_2_20cm_scaffold_4799_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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8269..8727
DNA (459bp) protein (153aa)
dsbD; cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_cura
Thiol:disulfide interchange protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJQ1_IGNAJ
dsbD; thiol:disulfide interchange protein
13_2_20cm_scaffold_4799_14
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(8868..9407)
DNA (540bp) protein (180aa)
putative acetyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017460C5
N-acetyltransferase GCN5
Tax=BJP_IG2102_BRC1_58_13
13_2_20cm_scaffold_4799_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9468..9581)
DNA (114bp) protein (38aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=320771 species="Bacteria; Verruco
Xylose isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH30_9BACT
Displaying 15 items

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