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13_2_20cm_scaffold_4832

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4832_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..374
DNA (372bp) protein (124aa)
DNA-binding response regulator PetR n=2 Tax=Bradyrhizobiaceae RepID=F7QFB2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36894.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
two component transcriptional regulator
13_2_20cm_scaffold_4832_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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371..1450
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rho
Sensor histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N1N8_RHOPA
integral membrane sensor signal transduction histidine kinase
13_2_20cm_scaffold_4832_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1417..1773
DNA (357bp) protein (119aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Putative two-component sensor n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHW4_9RHOB
sensor signal transduction histidine kinase
13_2_20cm_scaffold_4832_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1770..2459)
DNA (690bp) protein (230aa)
Transcriptional regulator, TetR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAX5_9RHOB
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJW10241.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rho
hypothetical protein
13_2_20cm_scaffold_4832_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2561..3400)
DNA (840bp) protein (280aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIV4_NITHX
13_2_20cm_scaffold_4832_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3637..4137)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEL6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11559.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
13_2_20cm_scaffold_4832_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4395..5345)
DNA (951bp) protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J5F1_9RHOB
13_2_20cm_scaffold_4832_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5566..6048)
DNA (483bp) protein (161aa)
Uncharacterized protein, YfiH family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPE1_9RHIZ
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="
hypothetical protein
13_2_20cm_scaffold_4832_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5987..6310)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LEL2_9RHOB
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH
hypothetical protein
13_2_20cm_scaffold_4832_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6385..7485)
DNA (1101bp) protein (367aa)
ATP synthase subunit beta n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034A82B9 rbh
ATP synthase subunit beta {ECO:0000313|EMBL:KIZ43675.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
hypothetical protein
13_2_20cm_scaffold_4832_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7482..8306)
DNA (825bp) protein (275aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1429916
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEM0_9RHOB rbh
prolipoprotein diacylglyceryl transferase
13_2_20cm_scaffold_4832_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8526..8789
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPJ9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29440.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
13_2_20cm_scaffold_4832_13
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8995..9777
DNA (783bp) protein (261aa)
50S ribosomal protein L25 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0I0_9BRAD
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1619232 s
50S ribosomal protein L25/general stress protein Ctc
13_2_20cm_scaffold_4832_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9918..10529
DNA (612bp) protein (204aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UB62_9RHOB
13_2_20cm_scaffold_4832_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10561..11667
DNA (1107bp) protein (369aa)
Ribosome-binding ATPase YchF n=1 Tax=Rhodovulum sp. PH10 RepID=J6U9X2_9RHOB
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulu
ychF; GTP-dependent nucleic acid-binding protein EngD
13_2_20cm_scaffold_4832_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11800..12093)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07RP4_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ05390.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
13_2_20cm_scaffold_4832_17
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12428..13255
DNA (828bp) protein (276aa)
Integrase family protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6DYU6_GEOSM
Site-specific integrase/recombinase {ECO:0000313|EMBL:BAR53479.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
integrase family protein
Displaying 17 items

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