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13_2_20cm_scaffold_5258

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5258_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..892
DNA (891bp) protein (297aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EJU6_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Tricarboxylate transport protein TctC
13_2_20cm_scaffold_5258_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1035..2420
DNA (1386bp) protein (462aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG92_RHOPX rbh
RNA modification protein, MiaB family
13_2_20cm_scaffold_5258_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2458..3477
DNA (1020bp) protein (340aa)
Phosphate starvation-inducible ATPase PhoH with RNA binding motif n=1 Tax=Rhodovulum sp. PH10 RepID=J6UCX3_9RHOB rbh
Phosphate starvation protein PhoH {ECO:0000313|EMBL:ETR77993.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-
phosphate starvation-inducible protein, PhoH-like protein
13_2_20cm_scaffold_5258_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3521..4063
DNA (543bp) protein (181aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1429916 species="Bacteria; P
Endoribonuclease YbeY n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YJD9_BRASO
metal-dependent hydrolase
13_2_20cm_scaffold_5258_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4069..4983
DNA (915bp) protein (305aa)
CBS:transporter-associated n=2 Tax=Oligotropha carboxidovorans RepID=B6JCT3_OLICO
putative hemolysin
Putative hemolysin {ECO:0000313|EMBL:AEI04753.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovoran
13_2_20cm_scaffold_5258_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5162..5482
DNA (321bp) protein (107aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1429916 species
Apolipoprotein N-acyltransferase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG96_RHOPX
apolipoprotein N-acyltransferase
13_2_20cm_scaffold_5258_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5506..6777
DNA (1272bp) protein (424aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=883079 species=
Apolipoprotein N-acyltransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P424_9BRAD
lnt; apolipoprotein N-acyltransferase
13_2_20cm_scaffold_5258_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7046..7462
DNA (417bp) protein (139aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS69_NITHX
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABA03287.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba
13_2_20cm_scaffold_5258_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7633..8907
DNA (1275bp) protein (425aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S-adenosylmethionine synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=METK_PARL1
S-adenosylmethionine synthetase
13_2_20cm_scaffold_5258_10
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8940..9686
DNA (747bp) protein (249aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E862_BRASB
13_2_20cm_scaffold_5258_11
unknown

Not on your lists

10198..10722
DNA (525bp) protein (175aa)

This feature has no annotations

13_2_20cm_scaffold_5258_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11099..11797
DNA (699bp) protein (233aa)
ribosome maturation factor RimP n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003674F4F
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
hypothetical protein
13_2_20cm_scaffold_5258_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11801..13411
DNA (1611bp) protein (537aa)
transcription elongation factor NusA n=1 Tax=Bradyrhizobium japonicum RepID=UPI000378C894
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
N-utilization substance protein A
13_2_20cm_scaffold_5258_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13420..14175
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H453_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50408.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_2_20cm_scaffold_5258_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..15406
DNA (1239bp) protein (413aa)
Translation initiation factor IF-2 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=IF2_RHOPB
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea
infB; translation initiation factor IF-2
Displaying 15 items

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