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13_2_20cm_scaffold_5569

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5569_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..864)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003651B19
D-3-phosphoglycerate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-3-phosphoglycerate dehydrogenase
13_2_20cm_scaffold_5569_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(861..1970)
DNA (1110bp) protein (370aa)
Transaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S4_GEMAT rbh
transaminase Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase class V
13_2_20cm_scaffold_5569_3
unknown

Not on your lists

2335..2448
DNA (114bp) protein (38aa)

This feature has no annotations

13_2_20cm_scaffold_5569_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2641..3126)
DNA (486bp) protein (162aa)
N-acetyltransferase GCN5; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Argininosuccinate lyase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z004_PHOPR
bifunctional argininosuccinate lyase/N-acetylglutamate synthase
13_2_20cm_scaffold_5569_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3123..4286)
DNA (1164bp) protein (388aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_Gemmatimonade
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
13_2_20cm_scaffold_5569_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4283..5050)
DNA (768bp) protein (256aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetylglutamate kinase n=2 Tax=Chloroflexus RepID=ARGB_CHLAA
acetylglutamate kinase
13_2_20cm_scaffold_5569_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5044..5214)
DNA (171bp) protein (57aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RBG_16_Gemmatimonadetes_66_8_curated
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
13_2_20cm_scaffold_5569_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

5952..8027
DNA (2076bp) protein (692aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AGY58328.1}; EC=3.4.19.1 {ECO:0000313|EMBL:AGY58328.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria;
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHI7_9CYAN
13_2_20cm_scaffold_5569_9
unknown

Not on your lists

comp(8078..8479)
DNA (402bp) protein (134aa)

This feature has no annotations

13_2_20cm_scaffold_5569_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8497..11265)
DNA (2769bp) protein (923aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE65_GEMAT
protein kinase rbh
Protein kinase {ECO:0000313|EMBL:AHG90389.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_5569_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11343..12347)
DNA (1005bp) protein (335aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
13_2_20cm_scaffold_5569_12
unknown

Not on your lists

comp(12322..13176)
DNA (855bp) protein (285aa)

This feature has no annotations

13_2_20cm_scaffold_5569_13
unknown

Not on your lists

comp(13143..13469)
DNA (327bp) protein (109aa)

This feature has no annotations

13_2_20cm_scaffold_5569_14
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13469..14191)
DNA (723bp) protein (241aa)
Glycosyl transferase family 2 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X4F5_DESRD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV69429.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Des
13_2_20cm_scaffold_5569_15
unknown

Not on your lists

comp(14175..14594)
DNA (420bp) protein (140aa)

This feature has no annotations

13_2_20cm_scaffold_5569_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14709..15704
DNA (996bp) protein (332aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative asparaginase
13_2_20cm_scaffold_5569_17

Not on your lists

15742..16845
DNA (1104bp) protein (368aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA10983.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_5569_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16856..17608)
DNA (753bp) protein (251aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_5569_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17602..17943)
DNA (342bp) protein (114aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
saccharopine dehydrogenase family protein
Saccharopine dehydrogenase family protein {ECO:0000313|EMBL:BAH37543.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aur
13_2_20cm_scaffold_5569_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18132..18707
DNA (576bp) protein (192aa)
TetR family transcriptional regulator n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00037AED96
TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bacterial regulatory s, tetR family protein
13_2_20cm_scaffold_5569_21
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18785..19618)
DNA (834bp) protein (278aa)
Metallophosphoesterase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UB90_MYXSD
Metallophosphoesterase {ECO:0000313|EMBL:KFE60800.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyala
metallophosphoesterase
13_2_20cm_scaffold_5569_22
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19960..21267
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262A16E
peptidase S41
Uncharacterized protein {ECO:0000313|EMBL:AIF46686.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_2_20cm_scaffold_5569_23
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21343..22161)
DNA (819bp) protein (273aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_16_Spirochaete_67_19_curated
Dienelactone hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9Q3_9BACT
Dienelactone hydrolase-related enzyme
13_2_20cm_scaffold_5569_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22158..23204)
DNA (1047bp) protein (349aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
13_2_20cm_scaffold_5569_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23264..24334)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR22_SORCE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_5569_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24331..24687)
DNA (357bp) protein (119aa)
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor id=3932661 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
13_2_20cm_scaffold_5569_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24684..25721)
DNA (1038bp) protein (346aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
diguanylate cyclase
13_2_20cm_scaffold_5569_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25728..26657)
DNA (930bp) protein (310aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Threonine dehydratase n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XCJ2_9PSEU
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_2_20cm_scaffold_5569_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(26659..29205)
DNA (2547bp) protein (849aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT rbh
DNA gyrase subunit A
13_2_20cm_scaffold_5569_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(29463..30152)
DNA (690bp) protein (230aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L3_GEMAT
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Alcohol dehydrogenase zinc-binding domain protein
Displaying 30 items

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