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13_2_20cm_scaffold_5620

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5620_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..624
DNA (624bp) protein (208aa)
sugar ABC transporter permease n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023789D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI02060.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_2_20cm_scaffold_5620_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1835..3088
DNA (1254bp) protein (418aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NJM1_RHILT
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJB08164.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
sugar ABC transporter periplasmic protein
13_2_20cm_scaffold_5620_3
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3235..4356
DNA (1122bp) protein (374aa)
UPI0003D6B309 related cluster n=1 Tax=unknown RepID=UPI0003D6B309
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:KFX70985.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-
13_2_20cm_scaffold_5620_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4376..4732
DNA (357bp) protein (119aa)
ferredoxin n=1 Tax=Amycolatopsis methanolica RepID=UPI00038035CE
hcaC2; Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AIJ23912.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis
13_2_20cm_scaffold_5620_5
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4729..5889)
DNA (1161bp) protein (387aa)
Galactonate dehydratase n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SVN5_9BACT rbh
galactonate dehydratase
Tax=BJP_IG2158_Anaerolineales_38_74
13_2_20cm_scaffold_5620_6
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5886..6269)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00037DE1F3
Xylose isomerase {ECO:0000313|EMBL:KIL35548.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
AP endonuclease, family 2
13_2_20cm_scaffold_5620_7
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(6829..7995)
DNA (1167bp) protein (389aa)
Galactonate dehydratase n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SVN5_9BACT
Galactonate dehydratase {ECO:0000313|EMBL:BAL59664.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
mandelate racemase/muconate lactonizing protein
13_2_20cm_scaffold_5620_8
unknown

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8037..8276
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_scaffold_5620_9
unknown

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8273..8485
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_5620_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8741..9361
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYE3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON12238.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.
hypothetical protein
13_2_20cm_scaffold_5620_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9354..10784)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003793BFC
Phosphodiesterase {ECO:0000313|EMBL:AKF82728.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus f
type I phosphodiesterase/nucleotide pyrophosphatase family protein
13_2_20cm_scaffold_5620_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(10781..11506)
DNA (726bp) protein (242aa)
Tax=RBG_16_Chloroflexi_56_8_curated
13_2_20cm_scaffold_5620_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11734..11997
DNA (264bp) protein (88aa)
Glyoxalase-like domain
Glyoxalase-like domain {ECO:0000313|EMBL:AIF82617.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitro
13_2_20cm_scaffold_5620_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

12163..13746
DNA (1584bp) protein (528aa)
Transmembrane efflux protein id=4709197 bin=GWC2_Chloroflexi_73_18 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
EmrB/QacA subfamily drug resistance transporter Tax=GWC2_RIF_CHLX_73_18_curated
EmrB/QacA subfamily drug resistance transporter
13_2_20cm_scaffold_5620_15

Not on your lists

13765..13968
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_5620_16

Not on your lists

13958..14437
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN10447.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_5620_17
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14434..15117)
DNA (684bp) protein (228aa)
Methyltransferase type 11 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBL1_CELFN
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADG74106.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 4
13_2_20cm_scaffold_5620_18
unknown

Not on your lists

comp(15322..15558)
DNA (237bp) protein (79aa)

This feature has no annotations

13_2_20cm_scaffold_5620_19
Cyanobium sp. PCC 7001, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15887..16102
DNA (216bp) protein (72aa)
Glycosyltransferase {ECO:0000313|EMBL:EDY37707.1}; TaxID=180281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. PCC 7001.;"
13_2_20cm_scaffold_5620_20
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16099..16719
DNA (621bp) protein (207aa)
Putative Dehydrogenase/reductase SDR family member 4 {ECO:0000313|EMBL:CDH43428.1}; EC=1.1.1.184 {ECO:0000313|EMBL:CDH43428.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; C
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFZ9_9CHLR
short chain dehydrogenase/reductase family oxidoreductase
13_2_20cm_scaffold_5620_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16716..17126
DNA (411bp) protein (137aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=7717912 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
hypothetical protein
13_2_20cm_scaffold_5620_22
unknown

Not on your lists

comp(17240..17317)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 22 items

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