ggKbase home page

13_2_20cm_scaffold_5901

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5901_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1..735)
DNA (735bp) protein (245aa)
mopA; protein MopA (EC:1.2.7.-); K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14426357 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
mopA; protein MopA (EC:1.2.7.-); K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=CSP1_2_Dadabacteria
nitrate reductase (EC:1.7.99.4)
13_2_20cm_scaffold_5901_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1296..1874)
DNA (579bp) protein (193aa)
cytochrome c3 Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c2 id=14426356 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
actA; menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA
13_2_20cm_scaffold_5901_3
unknown

Not on your lists

comp(1984..2274)
DNA (291bp) protein (97aa)

This feature has no annotations

13_2_20cm_scaffold_5901_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2440..3570)
DNA (1131bp) protein (377aa)
Mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=GWC2_Gemmatimonadetes_71_10_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_2_20cm_scaffold_5901_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3551..4711)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_5901_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4723..5877)
DNA (1155bp) protein (385aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase
13_2_20cm_scaffold_5901_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5967..6854)
DNA (888bp) protein (296aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDQ8_9BACL
dihydrodipicolinate synthetase
13_2_20cm_scaffold_5901_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6845..7468)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amidohydrolase 2
13_2_20cm_scaffold_5901_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7568..8368)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_5901_10
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8534..9148
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4RCR8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ89188.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
hypothetical protein
13_2_20cm_scaffold_5901_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9192..9989)
DNA (798bp) protein (266aa)
multidrug ABC transporter; K09686 antibiotic transport system permease protein id=14429039 bin=bin3_NC10 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
multidrug ABC transporter; K09686 antibiotic transport system permease protein Tax=CSP1_5_NC10
multidrug ABC transporter
13_2_20cm_scaffold_5901_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9992..10744)
DNA (753bp) protein (251aa)
daunorubicin resistance ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein id=14429040 bin=bin3_NC10 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
daunorubicin resistance ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein Tax=CSP1_5_NC10
daunorubicin resistance ABC transporter ATPase subunit
13_2_20cm_scaffold_5901_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10741..11853)
DNA (1113bp) protein (371aa)
pyrroloquinoline quinone biosynthesis protein PqqE n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003653C9B rbh
coenzyme PQQ biosynthesis protein E
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=526225 species="Bacteria; Actinobacteria; G
13_2_20cm_scaffold_5901_14
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11843..12130)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036C39D1
Coenzyme PQQ synthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; Pyrroloquinoline quinone biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; TaxID=305700 species="Bacteria; Proteobacteria; B
hypothetical protein
13_2_20cm_scaffold_5901_15
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12127..12840)
DNA (714bp) protein (238aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
Coenzyme PQQ synthesis protein C n=2 Tax=Saccharopolyspora erythraea RepID=A4FI40_SACEN
pqqC; pyrroloquinoline quinone biosynthesis protein PqqC
13_2_20cm_scaffold_5901_16
unknown

Not on your lists

comp(12837..12956)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 16 items

View Taxonomy