ggKbase home page

13_2_20cm_scaffold_5978

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5978_1

Not on your lists

1..372
DNA (372bp) protein (124aa)
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035CF79F
Marine sediment metagenome DNA, contig: S01H1_S20768 {ECO:0000313|EMBL:GAG19725.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_2_20cm_scaffold_5978_2
bacterium YEK0313, Bacteria

Not on your lists

comp(1058..1558)
DNA (501bp) protein (167aa)
Phasin n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4P7_STAND
Phasin protein {ECO:0000313|EMBL:CEJ11474.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
phasin
13_2_20cm_scaffold_5978_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1801..2178)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000300793F
Phasin 2 {ECO:0000313|EMBL:EJW12568.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
13_2_20cm_scaffold_5978_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2982..3434
DNA (453bp) protein (151aa)
Mandelate racemase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QYF2_RALPI
mandelate racemase/muconate lactonizing enzyme family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
mandelate racemase
13_2_20cm_scaffold_5978_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3614..4471
DNA (858bp) protein (286aa)
VWFA-like protein with metal ion dependent adhesion motif (MIDAS) n=1 Tax=Rhodovulum sp. PH10 RepID=J5PSQ9_9RHOB
VWFA-like protein with metal ion dependent adhesion motif (MIDAS) {ECO:0000313|EMBL:EJW12962.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
protein of unassigned function
13_2_20cm_scaffold_5978_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4529..5554
DNA (1026bp) protein (342aa)
iron ABC transporter substrate-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002D4E8DD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37007.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
ABC transporter substrate-binding protein
13_2_20cm_scaffold_5978_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5566..7272
DNA (1707bp) protein (569aa)
Ferric iron ABC transporter, permease protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6JCM5_9RHOB rbh
Ferric iron ABC transporter, permease protein {ECO:0000313|EMBL:EJW12960.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sour
ABC transporter permease
13_2_20cm_scaffold_5978_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7391..8713
DNA (1323bp) protein (441aa)
succinyl-CoA:3-ketoacid-coenzyme A transferase 1; K01027 3-oxoacid CoA-transferase [EC:2.8.3.5] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Acetate CoA-transferase YdiF n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RHJ2_MYCXE
succinyl-CoA:3-ketoacid-CoA transferase
13_2_20cm_scaffold_5978_9
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8880..10892
DNA (2013bp) protein (671aa)
cell envelope biogenesis protein AsmA n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035CC5C7
putative AsmA protein, assembly of outer membrane proteins
Putative AsmA protein, assembly of outer membrane proteins {ECO:0000313|EMBL:BAM87344.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
13_2_20cm_scaffold_5978_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10916..11728)
DNA (813bp) protein (271aa)
putrescine/spermidine ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI0003727640 rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD89478.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
13_2_20cm_scaffold_5978_11
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11731..12660)
DNA (930bp) protein (310aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G104_9BRAD
ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:BAL74441.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
13_2_20cm_scaffold_5978_12
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12673..12849)
DNA (177bp) protein (59aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiac
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035F3ACC
spermidine/putrescine ABC transporter ATP-binding subunit
13_2_20cm_scaffold_5978_13
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12846..13814)
DNA (969bp) protein (323aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Rhizobium sp. CF080 RepID=J3C4J2_9RHIZ
spermidine/putrescine ABC transporter ATPase
13_2_20cm_scaffold_5978_14

Not on your lists

comp(13875..15362)
DNA (1488bp) protein (496aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=uncultured bacterium B7P37metaSE RepID=C8CIK2_9BACT
13_2_20cm_scaffold_5978_15
unknown

Not on your lists

15407..15544
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 15 items

View Taxonomy