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13_2_20cm_scaffold_602

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_602_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..2770
DNA (2769bp) protein (923aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PAS/PAC sensor hybrid histidine kinase id=4942499 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
13_2_20cm_scaffold_602_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2772..3230)
DNA (459bp) protein (153aa)
intradiol ring-cleavage dioxygenase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
13_2_20cm_scaffold_602_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3251..4429
DNA (1179bp) protein (393aa)
Glycogen synthase id=1884913 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycogen synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RfaG2; glycosyltransferase
13_2_20cm_scaffold_602_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4438..5244
DNA (807bp) protein (269aa)
sugar phosphatase of HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable phosphotransferase id=1884917 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
had-superfamily hydrolase, subfamily iia
13_2_20cm_scaffold_602_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5313..5648
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Pseudogulbenkiania RepID=B9Z4N3_9NEIS
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_602_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5867..6346
DNA (480bp) protein (160aa)
Bacterioferritin n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMD9_ANADE
bacterioferritin; K03594 bacterioferritin Tax=RBG_16_Anaeromyxobacter_69_14_curated
bacterioferritin
13_2_20cm_scaffold_602_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6416..6826)
DNA (411bp) protein (137aa)
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Fimbrial protein pilin id=4953732 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fimbrial protein pilin
13_2_20cm_scaffold_602_8
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7107..7448
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XKL2_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH76952.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
13_2_20cm_scaffold_602_9
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7458..9269)
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003649FDC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN50717.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
TrkA-C domain-containing protein
13_2_20cm_scaffold_602_10
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9373..9522
DNA (150bp) protein (50aa)
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
hypothetical protein id=12555996 bin=CNBR_ACIDO species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_2_20cm_scaffold_602_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9529..11904)
DNA (2376bp) protein (792aa)
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-); K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Penicillin-binding protein, 1A family id=3640482 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
1A family penicillin-binding protein
13_2_20cm_scaffold_602_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11970..12830)
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX09182.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
family 2 glycosyl transferase id=15192936 bin=GWC2_NOV_55_46 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
family 2 glycosyl transferase
13_2_20cm_scaffold_602_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12893..13432)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=A1VI10_DESVV
Uncharacterized protein {ECO:0000313|EMBL:ETX01910.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
FemAB-like protein
13_2_20cm_scaffold_602_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13458..13856)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01855.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
FemAB-like protein id=12557448 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_2_20cm_scaffold_602_15

Not on your lists

14177..17686
DNA (3510bp) protein (1170aa)
Carbohydrate-binding CenC domain-containing protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RR45_SEROD id=137782 bin=ACD9 species=Serratia plymuthica genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
Carbohydrate-binding CenC protein {ECO:0000313|EMBL:EKE18917.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
srpA; platelet-binding glycoprotein
13_2_20cm_scaffold_602_16
unknown

Not on your lists

17689..17994
DNA (306bp) protein (102aa)

This feature has no annotations

13_2_20cm_scaffold_602_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18193..19440
DNA (1248bp) protein (416aa)
O-antigen polymerase family protein n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XVA1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ETX01854.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
polymerase
13_2_20cm_scaffold_602_18
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19437..20390
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=CG_Delta_03
13_2_20cm_scaffold_602_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20431..20826)
DNA (396bp) protein (132aa)
Putative endoribonuclease L-PSP n=1 Tax=uncultured Acidilobus sp. MG RepID=V4K794_9CREN
putative endoribonuclease L-PSP; K07567 TdcF protein Tax=RBG_16_Euryarchaeota_68_12_curated
YjgH/F family protein - translation initiation inhibitor
13_2_20cm_scaffold_602_20
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21157..21558)
DNA (402bp) protein (134aa)
Tax=BJP_08E140C01_Anaerolineales_40_8
13_2_20cm_scaffold_602_21
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(21555..24458)
DNA (2904bp) protein (968aa)
Glr2171 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIL2_GLOVI
hypothetical protein
Glr2171 protein {ECO:0000313|EMBL:BAC90112.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_602_22
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24744..25433
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01850.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Methyltransferase type 11 id=4530352 bin=GWC2_Deltaproteobacteria_55_46 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
13_2_20cm_scaffold_602_23
unknown

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25433..25705
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying 23 items

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