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13_2_20cm_scaffold_6252

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6252_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..997)
DNA (996bp) protein (332aa)
cyclic nucleotide-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cyclic nucleotide-binding protein id=14625478 bin=bin7_NC10_sister species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
peptidase M50
13_2_20cm_scaffold_6252_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(997..1497)
DNA (501bp) protein (167aa)
Cyclic nucleotide-binding protein id=3779687 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyclic nucleotide-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Crp/Fnr family transcriptional regulator
13_2_20cm_scaffold_6252_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1518..2435)
DNA (918bp) protein (306aa)
hypothetical protein id=3779689 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_6252_4
unknown

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2673..2900
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_scaffold_6252_5
unknown

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2948..3328
DNA (381bp) protein (127aa)

This feature has no annotations

13_2_20cm_scaffold_6252_6
CSP1_5_NC10, NC10, Bacteria

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3430..3798
DNA (369bp) protein (123aa)
hypothetical protein id=14430680 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_2_20cm_scaffold_6252_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3925..4314
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00037E2E72
rare lipoprotein A; K03642 rare lipoprotein A Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
rare lipoprotein A
13_2_20cm_scaffold_6252_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4319..5626)
DNA (1308bp) protein (436aa)
phthalate 4,5-dioxygenase (EC:1.14.12.7)
Phthalate 4,5-dioxygenase {ECO:0000313|EMBL:AEA26090.1}; EC=1.14.12.7 {ECO:0000313|EMBL:AEA26090.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
Phthalate 4,5-dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPQ7_PSEUX
13_2_20cm_scaffold_6252_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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5873..6652
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035C934C
beta-lactamase domain-containing protein Tax=RBG_16_Chloroflexi_68_14_curated
beta-lactamase domain-containing protein
13_2_20cm_scaffold_6252_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6692..7915)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003664F29 rbh
integral membrane sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
integral membrane sensor hybrid histidine kinase
13_2_20cm_scaffold_6252_11
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8223..8513)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003613296
KaiB domain-containing protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
13_2_20cm_scaffold_6252_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8557..8847)
DNA (291bp) protein (97aa)
KaiB-like protein 1 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YH24_9DELT
KaiB domain-containing protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_2_20cm_scaffold_6252_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(8876..10594)
DNA (1719bp) protein (573aa)
circadian clock protein KaiC (EC:2.7.11.1); K08482 circadian clock protein KaiC Tax=RBG_16_RIF_WS3X_71_46_curated
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC n=1 Tax=Geobacter sp. (strain FRC-32) RepID=B9M6C3_GEOSF id=5224441 bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
13_2_20cm_scaffold_6252_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10635..11873)
DNA (1239bp) protein (413aa)
amidohydrolase n=1 Tax=Sporichthya polymorpha RepID=UPI00036FF3CE
Uncharacterized protein {ECO:0000313|EMBL:ETX08064.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_2_20cm_scaffold_6252_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11992..13179
DNA (1188bp) protein (396aa)
extradiol ring-cleavage dioxygenase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628CAC
Uncharacterized protein {ECO:0000313|EMBL:ETX06511.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
extradiol ring-cleavage dioxygenase class III protein subunit B
13_2_20cm_scaffold_6252_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13588..14097)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETX01526.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
luciferase
13_2_20cm_scaffold_6252_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14220..15782
DNA (1563bp) protein (521aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EDY20630.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EDY20630.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sou
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYT9_9BACT
PAS domain-containing protein
13_2_20cm_scaffold_6252_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15800..16162)
DNA (363bp) protein (121aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034B878D
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:AKF10101.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.
13_2_20cm_scaffold_6252_19

Not on your lists

16428..17651
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003787A7C
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06055.1}; TaxID=455506 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_005H07.;"
major facilitator superfamily MFS_1
13_2_20cm_scaffold_6252_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17651..17872
DNA (222bp) protein (74aa)
suhB; inositol-1-monophosphatase (Inositol-1-phosphatase) (I-1-Pase) (EC:3.1.3.25) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-galactose-1-phosphate phosphatase (EC:3.1.3.25); K10047 inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase [EC:3.1.3.25 3.1.3.-]
Histidinol-phosphate phosphatase, putative id=4961242 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 20 items

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