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13_2_20cm_scaffold_627

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_627_1
unknown

Not on your lists

2..457
DNA (456bp) protein (152aa)

This feature has no annotations

13_2_20cm_scaffold_627_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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487..1023
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Neisseria sp. oral taxon 020 str. F0370 RepID=L1P2Z6_9NEIS
putative lipoprotein Tax=RBG_16_Spirochaete_67_19_curated
13_2_20cm_scaffold_627_3
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1034..1810)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E442_GEOSM
hypothetical protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
hypothetical protein
13_2_20cm_scaffold_627_4
unknown

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comp(1921..2349)
DNA (429bp) protein (143aa)

This feature has no annotations

13_2_20cm_scaffold_627_5
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2357..2770)
DNA (414bp) protein (138aa)
Putative doxX family protein n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum UCMB5113 RepID=S6FP82_BACAM
Putative doxX family protein
Putative doxX family protein {ECO:0000313|EMBL:CDG28463.1}; TaxID=1338518 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens subsp. plantar
13_2_20cm_scaffold_627_6
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2839..3405)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00035D88F7
TetR family transcriptional regulator
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
13_2_20cm_scaffold_627_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3867..4061
DNA (195bp) protein (65aa)
Tax=RBG_16_Acidobacteria_70_10_curated
13_2_20cm_scaffold_627_8
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4485..4943
DNA (459bp) protein (153aa)
Phage integrase n=1 Tax=Limnobacter sp. MED105 RepID=A6GR01_9BURK
Phage integrase {ECO:0000313|EMBL:EDM83554.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
Phage integrase
13_2_20cm_scaffold_627_9
unknown

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4999..5484
DNA (486bp) protein (162aa)

This feature has no annotations

13_2_20cm_scaffold_627_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5646..7193)
DNA (1548bp) protein (516aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Extracellular solute-binding protein family 5 id=1884954 bin=GWA2_Methylomirabilis_73_35 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_2_20cm_scaffold_627_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7246..8685)
DNA (1440bp) protein (480aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase id=1884950 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_627_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8712..9875
DNA (1164bp) protein (388aa)
Uncharacterised monovalent cation:proton antiporter, CPA2 family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBM9_9BACT
ybaL; monovalent cation:proton antiporter
Uncharacterised monovalent cation:proton antiporter, CPA2 family {ECO:0000313|EMBL:CBK40638.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candid
13_2_20cm_scaffold_627_13
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

9866..10675
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase (Fad-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29572_ARCFU
fad-2; enoyl-CoA hydratase
Enoyl-CoA hydratase (Fad-2) {ECO:0000313|EMBL:AAB90553.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidu
13_2_20cm_scaffold_627_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10848..11693)
DNA (846bp) protein (282aa)
recombinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626659 bin=bin7_NC10_sister species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_627_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11759..13327)
DNA (1569bp) protein (523aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=GWA2_Rokubacteria_73_35_curated
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase id=1884939 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_627_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13398..14564
DNA (1167bp) protein (389aa)
Metal dependent phosphohydrolase id=1884935 bin=GWA2_Methylomirabilis_73_35 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase Tax=GWA2_Rokubacteria_73_35_curated
metal dependent phosphohydrolase
Displaying 16 items

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