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13_2_20cm_scaffold_6372

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6372_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(158..964)
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB59489.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina b
13_2_20cm_scaffold_6372_2
unknown

Not on your lists

1038..2159
DNA (1122bp) protein (374aa)

This feature has no annotations

13_2_20cm_scaffold_6372_3
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2184..2978
DNA (795bp) protein (265aa)
Luciferase family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY7_ROSCS
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABU56374.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus c
13_2_20cm_scaffold_6372_4
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3032..3973)
DNA (942bp) protein (314aa)
Fumarylacetoacetate (FAA) hydrolase family protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5D1_AGRVS
fumarylacetoacetate (FAA) hydrolase family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
fumarylacetoacetate (FAA) hydrolase family protein
13_2_20cm_scaffold_6372_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4156..4509
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00038278C1
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
13_2_20cm_scaffold_6372_6
unknown

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4534..4815
DNA (282bp) protein (94aa)

This feature has no annotations

13_2_20cm_scaffold_6372_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4782..5618
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95958.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein id=5081769 bin=GWF1_Burkholderiales_GWF1_66_17 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
barH; barh protein
13_2_20cm_scaffold_6372_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5627..6133
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003632465
Uncharacterized protein {ECO:0000313|EMBL:ETX00573.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
dioxygenase
13_2_20cm_scaffold_6372_9
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6515..6787
DNA (273bp) protein (91aa)
Sigma-24 (FecI-like) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IIH1_ANADE
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RifOxyA12_full_Proteobacteria_58_15_curated
sigma-24 FecI-like protein
13_2_20cm_scaffold_6372_10
unknown

Not on your lists

6784..7179
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_scaffold_6372_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7222..8334
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QNS8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF02166.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_2_20cm_scaffold_6372_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8421..9599
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003629DA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX01280.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
dihydroorotase
13_2_20cm_scaffold_6372_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9602..10615
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01873.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
luciferase-like protein id=14626337 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
13_2_20cm_scaffold_6372_14
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

10632..11015
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MV54_PYRCJ
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABO08521.1}; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum calidifontis (st
13_2_20cm_scaffold_6372_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10993..11994)
DNA (1002bp) protein (334aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW93288.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like protein id=14626177 bin=bin7_NC10_sister species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
13_2_20cm_scaffold_6372_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11991..12278)
DNA (288bp) protein (96aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZZ0_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA24823.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
13_2_20cm_scaffold_6372_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12298..13860)
DNA (1563bp) protein (521aa)
lcfB4; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3)
LcfB2: long-chain-fatty-acid--CoA ligase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHT7_DESTT
lcfB3; long-chain-fatty-acid--CoA ligase LcfB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_2_20cm_scaffold_6372_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13954..14502
DNA (549bp) protein (183aa)
Uncharacterized protein id=4219880 bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
carboxymuconolactone decarboxylase family protein
13_2_20cm_scaffold_6372_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14514..15611)
DNA (1098bp) protein (366aa)
major facilitator transporter Tax=GWA2_Rokubacteria_70_23_curated
Major facilitator superfamily MFS_1 id=4427422 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
major facilitator superfamily MFS_1
13_2_20cm_scaffold_6372_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15752..16042)
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Antibiotic biosynthesis monooxygenase id=2216078 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antibiotic biosynthesis monooxygenase
13_2_20cm_scaffold_6372_21
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16188..17150)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. MAS1 RepID=V6VF37_9BACI
Methyltransferase, FkbM family {ECO:0000313|EMBL:KJE25622.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
putative methyltransferase FkbM-family
13_2_20cm_scaffold_6372_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17200..19278)
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F4A75B rbh
atypical hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
atypical hybrid histidine kinase
13_2_20cm_scaffold_6372_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19307..21106)
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=56 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiace
Amb7 n=1 Tax=Sorangium cellulosum RepID=A1YBS2_SORCE
GAF sensor hybrid histidine kinase
13_2_20cm_scaffold_6372_24
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21103..22095)
DNA (993bp) protein (331aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ram
Candidate histidine kinase, atypical hybrid n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX94_RAMTT
atypical hybrid histidine kinase
Displaying 24 items

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