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13_2_20cm_scaffold_652

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_652_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(79..1029)
DNA (951bp) protein (317aa)
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Luciferase family protein id=3842152 bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
13_2_20cm_scaffold_652_2
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1113..2330
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGJ5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:CCH77480.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
13_2_20cm_scaffold_652_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2398..3411
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DBACD2
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
Hypothetical Protein
13_2_20cm_scaffold_652_4
unknown

Not on your lists

3445..3669
DNA (225bp) protein (75aa)

This feature has no annotations

13_2_20cm_scaffold_652_5
unknown

Not on your lists

comp(3682..4071)
DNA (390bp) protein (130aa)

This feature has no annotations

13_2_20cm_scaffold_652_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4106..5644
DNA (1539bp) protein (513aa)
2,4-dienoyl-CoA reductase (EC:1.3.1.34)
NADH:flavin oxidoreductase/NADH oxidase id=2855813 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
NemA3; NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_652_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5771..6676
DNA (906bp) protein (302aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Uncharacterized protein {ECO:0000313|EMBL:ETX02403.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_652_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6704..7300)
DNA (597bp) protein (199aa)
Uncharacterized protein id=4704583 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_652_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7433..8305
DNA (873bp) protein (291aa)
Gluconolactonase (EC:3.1.1.17) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SMP-30/gluconolaconase/LRE domain-containing protein (EC:3.1.1.17)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IUV5_NOSP7
13_2_20cm_scaffold_652_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

8390..9538
DNA (1149bp) protein (383aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU86_RUBXD
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABG05042.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae
13_2_20cm_scaffold_652_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9644..11227
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003796ED2 rbh
NifA subfamily transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fis family transcriptional regulator
13_2_20cm_scaffold_652_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11416..11673
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16460.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_652_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11691..12332
DNA (642bp) protein (214aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14429413 bin=bin3_NC10 species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin3_NC10 organism_group=NC10
putative RNA polymerase ECF-type sigma factor
13_2_20cm_scaffold_652_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12394..12639
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U6F4_9DELT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_scaffold_652_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12666..13376
DNA (711bp) protein (237aa)
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630CE7
SAM-dependent methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ubiquinone/menaquinone biosynthesis methyltransferase
13_2_20cm_scaffold_652_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13381..13977)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B52CE5
methylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_652_17
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13979..15094)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUS8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ70975.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;"
hypothetical protein
13_2_20cm_scaffold_652_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15091..15831)
DNA (741bp) protein (247aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase family 2 id=1746137 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
13_2_20cm_scaffold_652_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16034..16567
DNA (534bp) protein (178aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4911276 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_652_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16579..16992
DNA (414bp) protein (138aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Uncharacterized protein id=4181317 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying 20 items

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