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13_2_20cm_scaffold_6731

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6731_1
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobac
13_2_20cm_scaffold_6731_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(222..1670)
DNA (1449bp) protein (483aa)
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_02_
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB4_9BACT
13_2_20cm_scaffold_6731_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1709..3424)
DNA (1716bp) protein (572aa)
ftsI; peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsI; peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB3_9BACT
13_2_20cm_scaffold_6731_4
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(3444..3755)
DNA (312bp) protein (104aa)
hypothetical protein
Cell division protein FtsL Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
13_2_20cm_scaffold_6731_5
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3752..4651)
DNA (900bp) protein (300aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QFR8_9FIRM rbh
S-adenosyl-methyltransferase MraW
13_2_20cm_scaffold_6731_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4896..6116)
DNA (1221bp) protein (407aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparagine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBB0_9BACT rbh
13_2_20cm_scaffold_6731_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6197..7357
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034944F2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Na-Ca exchanger/integrin-beta4
13_2_20cm_scaffold_6731_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

7431..7613
DNA (183bp) protein (61aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_2_20cm_scaffold_6731_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7676..7864
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40210.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_6731_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

7861..8793
DNA (933bp) protein (311aa)
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF2_9BACT
13_2_20cm_scaffold_6731_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8824..9357)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_scaffold_6731_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(9480..9797)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_2_20cm_scaffold_6731_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9808..10188)
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_2_20cm_scaffold_6731_14
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10185..11453)
DNA (1269bp) protein (423aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF8_9BACT
13_2_20cm_scaffold_6731_15
unknown

Not on your lists

comp(11465..11749)
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying 15 items

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