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13_2_20cm_scaffold_6765

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6765_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3..992
DNA (990bp) protein (330aa)
putative oxidoreductase; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative oxidoreductase
13_2_20cm_scaffold_6765_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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985..2325
DNA (1341bp) protein (447aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14426358 bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
Polysulfide reductase NrfD
13_2_20cm_scaffold_6765_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2322..2885
DNA (564bp) protein (188aa)
hypothetical membrane protein id=14626219 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical membrane protein Tax=CSP1_6_Rokubacteria
Protein of unknown function DUF3341
13_2_20cm_scaffold_6765_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2878..3432
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3K5_9PROT
cytochrome c class I Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c class I
13_2_20cm_scaffold_6765_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3429..4637
DNA (1209bp) protein (403aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical membrane protein id=24582159 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_2_20cm_scaffold_6765_6
unknown

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4874..5068
DNA (195bp) protein (65aa)

This feature has no annotations

13_2_20cm_scaffold_6765_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5133..6092
DNA (960bp) protein (320aa)
Xanthine and CO dehydrogenases maturation factor n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4G9_PELTS
XdhC; xanthine and CO dehydrogenases maturation factor; K07402 xanthine dehydrogenase accessory factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
XdhC; xanthine and CO dehydrogenases maturation factor
13_2_20cm_scaffold_6765_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6089..7072)
DNA (984bp) protein (328aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87978.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6765_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7056..7565)
DNA (510bp) protein (170aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_6765_10
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(7573..10908)
DNA (3336bp) protein (1112aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I866_CALAS
hypothetical protein; K07114 uncharacterized protein Tax=RBG_13_Chloroflexi_56_8_curated
hypothetical protein
13_2_20cm_scaffold_6765_11
unknown

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comp(10928..12007)
DNA (1080bp) protein (360aa)

This feature has no annotations

13_2_20cm_scaffold_6765_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12142..12618
DNA (477bp) protein (159aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG88813.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6765_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13234..15708
DNA (2475bp) protein (825aa)
hypothetical protein id=14425243 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_6765_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15684..16613)
DNA (930bp) protein (310aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
phosphoesterase PA-phosphatase-like protein id=1249613 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_2_20cm_scaffold_6765_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(16604..17578)
DNA (975bp) protein (325aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase id=7717902 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
13_2_20cm_scaffold_6765_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17575..18675)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036686F2
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_6765_17
unknown

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comp(18690..18773)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 17 items

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