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13_2_20cm_scaffold_6986

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6986_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..988
DNA (987bp) protein (329aa)
dnaE1; DNA polymerase III, alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=GWA2_Rokubacteria_73_35_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QX2_SOLUE
13_2_20cm_scaffold_6986_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1010..1768
DNA (759bp) protein (253aa)
short-chain dehydrogenase/reductase sdr; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-deoxy-D-gluconate 3-dehydrogenase id=4472645 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
short-chain dehydrogenase/reductase sdr
13_2_20cm_scaffold_6986_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1956..2360
DNA (405bp) protein (135aa)
putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative lipoprotein id=14625651 bin=bin7_NC10_sister species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_6986_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2439..3935)
DNA (1497bp) protein (499aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=14625649 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
13_2_20cm_scaffold_6986_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3938..4756)
DNA (819bp) protein (273aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31) Tax=GWA2_Rokubacteria_73_35_curated
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase (6PGL) id=3814683 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_6986_6
unknown

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comp(5246..5935)
DNA (690bp) protein (230aa)

This feature has no annotations

13_2_20cm_scaffold_6986_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6120..6338
DNA (219bp) protein (73aa)
hypothetical protein id=3814680 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_6986_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6672..7898
DNA (1227bp) protein (409aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3560948 bin=GWC2_Methylomirabilis_70_24 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_6986_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7908..8864)
DNA (957bp) protein (319aa)
membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein, putative id=4365892 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_6986_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8897..9799
DNA (903bp) protein (301aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase id=3261976 bin=GWA2_Methylomirabilis_73_35 species=Rhipicephalus pulchellus genus=Rhipicephalus taxon_order=Ixodida taxon_class=Arachnida phylum=Arthropoda tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxyisobutyrate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_6986_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9844..10161
DNA (318bp) protein (106aa)
GYD domain superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GYD domain superfamily id=4895583 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GYD domain superfamily
13_2_20cm_scaffold_6986_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10158..10628
DNA (471bp) protein (157aa)
Fe-S-cluster-containing hydrogenase components 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase id=14626791 bin=bin7_NC10_sister species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase
13_2_20cm_scaffold_6986_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10628..11953
DNA (1326bp) protein (442aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_2_20cm_scaffold_6986_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11950..13899
DNA (1950bp) protein (650aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14626789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
13_2_20cm_scaffold_6986_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14053..14424
DNA (372bp) protein (124aa)
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-hydroxy-3-oxopropionate reductase id=4931803 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-hydroxy-3-oxopropionate reductase
Displaying 15 items

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