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13_2_20cm_scaffold_715

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_715_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..872)
DNA (870bp) protein (290aa)
hypothetical protein; K07112 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662437 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_715_2
unknown

Not on your lists

comp(1065..1439)
DNA (375bp) protein (125aa)

This feature has no annotations

13_2_20cm_scaffold_715_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1715..3793)
DNA (2079bp) protein (693aa)
translation elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fusA; elongation factor G
13_2_20cm_scaffold_715_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3892..5133)
DNA (1242bp) protein (414aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
threonine synthase
13_2_20cm_scaffold_715_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5141..6097)
DNA (957bp) protein (319aa)
hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative hydrolase id=4350137 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
fumarylacetoacetate (FAA) hydrolase
13_2_20cm_scaffold_715_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6101..6334)
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_715_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6451..7443)
DNA (993bp) protein (331aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=3662441 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_715_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7451..8050)
DNA (600bp) protein (200aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625615 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_715_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8047..9072)
DNA (1026bp) protein (342aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) id=14625616 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) Tax=CSP1_6_Rokubacteria
theronine dehydrogenase-like Zn-dependent dehydrogenase
13_2_20cm_scaffold_715_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9069..10100)
DNA (1032bp) protein (344aa)
alcohol dehydrogenase (EC:1.1.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alcohol dehydrogenase (EC:1.1.1.1)
Putative alcohol dehydrogenase id=4350134 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_715_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10147..11016)
DNA (870bp) protein (290aa)
squalene/phytoene synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
squalene/phytoene synthase id=14625618 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
squalene/phytoene synthase
13_2_20cm_scaffold_715_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11013..12032)
DNA (1020bp) protein (340aa)
hopanoid-associated sugar epimerase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hopanoid-associated sugar epimerase id=4350132 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hopanoid-associated sugar epimerase
13_2_20cm_scaffold_715_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12054..12731)
DNA (678bp) protein (226aa)
nucleoside phosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2224624 bin=GWA2_Methylomirabilis_73_35 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nucleoside phosphorylase
13_2_20cm_scaffold_715_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12728..13057)
DNA (330bp) protein (110aa)
Radical SAM domain protein id=2224623 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_715_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13061..14083)
DNA (1023bp) protein (341aa)
radical SAM protein Tax=GWA2_Rokubacteria_73_35_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Radical SAM superfamily enzyme
13_2_20cm_scaffold_715_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14080..14829)
DNA (750bp) protein (250aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein-like protein id=2224622 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_715_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14852..16372
DNA (1521bp) protein (507aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=3818237 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 17 items

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