ggKbase home page

13_2_20cm_scaffold_7219

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_7219_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1..405
DNA (405bp) protein (135aa)
2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPU2_9FIRM
13_2_20cm_scaffold_7219_2
unknown

Not on your lists

comp(423..614)
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_7219_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

713..955
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000371F3A4
transcription factor Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
transcription factor
13_2_20cm_scaffold_7219_4
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

982..1425
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AFA78
Polyketide cyclase/dehydrase Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
Polyketide cyclase/dehydrase
13_2_20cm_scaffold_7219_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1494..2339
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037BF30C
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_scaffold_7219_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2354..2629)
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RBG_16_Euryarchaeota_68_13_curated
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRV0_NATM8
13_2_20cm_scaffold_7219_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2710..3858
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F6550
CBS-domain-containing membrane protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_7219_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3850..4956)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037E86E2
histone deacetylase Tax=RBG_16_Euryarchaeota_67_27_curated
histone deacetylase superfamily protein
13_2_20cm_scaffold_7219_9
unknown

Not on your lists

comp(4994..5296)
DNA (303bp) protein (101aa)

This feature has no annotations

13_2_20cm_scaffold_7219_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5477..6799
DNA (1323bp) protein (441aa)
PKD domain-containing protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHJ6_THEPS
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_67_27_curated
PKD domain-containing protein
13_2_20cm_scaffold_7219_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6976..7446
DNA (471bp) protein (157aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured prokaryote RepID=H5SCN9_9ZZZZ
N-acetyltransferase GCN5 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
N-acetyltransferase GCN5
13_2_20cm_scaffold_7219_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7451..8542)
DNA (1092bp) protein (364aa)
proline dipeptidase; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9FA3
hypothetical protein
13_2_20cm_scaffold_7219_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8677..8967
DNA (291bp) protein (97aa)
ribonuclease p protein subunit rpp21 (EC:3.1.26.5); K03540 ribonuclease P protein subunit RPR2 [EC:3.1.26.5] Tax=RBG_16_Euryarchaeota_67_27_curated
RPR2; ribonuclease P protein component 4 (EC:3.1.26.5)
Ribonuclease P protein component 4 n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L4Q0_9EURY
13_2_20cm_scaffold_7219_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8964..9818)
DNA (855bp) protein (285aa)
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_16_Euryarchaeota_68_13_curated
Putative ABC transporter permease protein id=1699494 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ABC transporter permease
13_2_20cm_scaffold_7219_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9815..10792)
DNA (978bp) protein (326aa)
ABC transporter Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC-2 type transport system protein id=4832869 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter
13_2_20cm_scaffold_7219_16
unknown

Not on your lists

10876..11106
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_7219_17
unknown

Not on your lists

11155..11379
DNA (225bp) protein (75aa)

This feature has no annotations

13_2_20cm_scaffold_7219_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11798..11989)
DNA (192bp) protein (64aa)
30S ribosomal protein S17e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T2T4_9EURY
rps17E; 30S ribosomal protein S17e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps17E; 30S ribosomal protein S17e
13_2_20cm_scaffold_7219_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12201..12365
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677319
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_scaffold_7219_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12366..13145)
DNA (780bp) protein (260aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NRL2_9FIRM
enoyl-CoA hydratase/carnithine racemase Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_7219_21
unknown

Not on your lists

13345..13848
DNA (504bp) protein (168aa)

This feature has no annotations

Displaying 21 items

View Taxonomy