ggKbase home page

13_2_20cm_scaffold_73

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_73_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9..1235)
DNA (1227bp) protein (409aa)
Glycosyltransferase 28 domain-containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JND9_9GAMM
glycosyl transferase family protein
Glycosyltransferase 28 domain-containing protein {ECO:0000313|EMBL:AEM47169.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithi
13_2_20cm_scaffold_73_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1245..2333)
DNA (1089bp) protein (363aa)
Putative glycosyl transferase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QS05_NOSS7
Putative glycosyl transferase {ECO:0000313|EMBL:KCZ73403.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperede
putative glycosyl transferase
13_2_20cm_scaffold_73_3
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2333..3316)
DNA (984bp) protein (328aa)
RimK-like ATP-grasp domain protein id=4677481 bin=GWA2_Elusimicrobia_56_46 species=Propionibacterium propionicum genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
RimK-like ATP-grasp domain protein Tax=GWC2_Elusimicrobia_56_31_curated
RimK-like ATP-grasp domain protein
13_2_20cm_scaffold_73_4
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3593..4459
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWS0_SORCE
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:KIG15468.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;
hypothetical protein
13_2_20cm_scaffold_73_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4745..6121)
DNA (1377bp) protein (459aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003730D82
protein kinase
13_2_20cm_scaffold_73_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6121..7947)
DNA (1827bp) protein (609aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
13_2_20cm_scaffold_73_7
unknown

Not on your lists

comp(7951..8181)
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_73_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8392..9315
DNA (924bp) protein (308aa)
chemotaxis protein CheY n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036FDBA1
response regulator receiver modulated diguanylate cyclase
Response regulator PleD {ECO:0000313|EMBL:GAM11701.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1
13_2_20cm_scaffold_73_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9623..11155
DNA (1533bp) protein (511aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
NtrC family two-component response regulator
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37620.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_2_20cm_scaffold_73_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11152..12333
DNA (1182bp) protein (394aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
13_2_20cm_scaffold_73_11
unknown

Not on your lists

comp(13332..14357)
DNA (1026bp) protein (342aa)

This feature has no annotations

13_2_20cm_scaffold_73_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14435..15421)
DNA (987bp) protein (329aa)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G3_GEMAT
nucleoside-diphosphate-sugar epimerase
13_2_20cm_scaffold_73_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15440..16267)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_73_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16304..18721)
DNA (2418bp) protein (806aa)
Putative exopolysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W1_GEMAT
putative exopolysaccharide biosynthesis protein
Putative exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAH37621.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
13_2_20cm_scaffold_73_15
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19055..20608
DNA (1554bp) protein (518aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE8_NITWC rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJS11981.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
polysaccharide biosynthesis protein
13_2_20cm_scaffold_73_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20618..21733)
DNA (1116bp) protein (372aa)
HPr kinase id=2512896 bin=GWC2_Chloroflexi_73_18 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
HPr kinase Tax=GWC2_RIF_CHLX_73_18_curated
HPr kinase
13_2_20cm_scaffold_73_17
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

21941..22666
DNA (726bp) protein (242aa)
Tax=RBG_16_Caldithrix_48_16_curated
13_2_20cm_scaffold_73_18
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

22676..23398
DNA (723bp) protein (241aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RBG_16_Caldithrix_48_16_curated
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNM1_ROSCS
13_2_20cm_scaffold_73_19
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

23409..24581
DNA (1173bp) protein (391aa)
glycosyl transferase, family II Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Glycosyl transferase, family II id=2868576 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
CESA-like subfamily glycosyltransferase
13_2_20cm_scaffold_73_20
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

24587..26047
DNA (1461bp) protein (487aa)
O-antigen polymerase Tax=RBG_16_Caldithrix_48_16_curated
O-antigen polymerase id=2868574 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
O-antigen polymerase
13_2_20cm_scaffold_73_21

Not on your lists

26059..26763
DNA (705bp) protein (235aa)
Marine sediment metagenome DNA, contig: S01H1_L04771 {ECO:0000313|EMBL:GAF70877.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Thymidylate kinase id=2512886 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_2_20cm_scaffold_73_22
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

26756..27997
DNA (1242bp) protein (414aa)
Hydrolase, exosortase system type 1 associated id=2512884 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_2_20cm_scaffold_73_23
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

28008..28988
DNA (981bp) protein (327aa)
Polysaccharide deacetylase domain protein id=2512882 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
polysaccharide deacetylase Tax=GWC2_RIF_CHLX_73_18_curated
polysaccharide deacetylase
13_2_20cm_scaffold_73_24
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

28985..30298
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000377CDEE rbh
group 1 glycosyl transferase Tax=RBG_16_Caldithrix_48_16_curated
group 1 glycosyl transferase
13_2_20cm_scaffold_73_25
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30477..32741
DNA (2265bp) protein (755aa)
Alkaline phosphatase {ECO:0000313|EMBL:CCH17161.1}; EC=3.1.3.1 {ECO:0000313|EMBL:CCH17161.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;"
Alkaline phosphatase (EC:3.1.3.1)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000382B79C
13_2_20cm_scaffold_73_26
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(32796..35198)
DNA (2403bp) protein (801aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003819787 rbh
Putative uncharacterized protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein
13_2_20cm_scaffold_73_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(35232..36380)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037D6254
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_2_20cm_scaffold_73_28
unknown

Not on your lists

36497..37126
DNA (630bp) protein (210aa)

This feature has no annotations

13_2_20cm_scaffold_73_29
unknown

Not on your lists

37229..37786
DNA (558bp) protein (186aa)

This feature has no annotations

13_2_20cm_scaffold_73_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(38395..39453)
DNA (1059bp) protein (353aa)
GTPase HflX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C4_GEMAT
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmat
Displaying 30 items

View Taxonomy