ggKbase home page

13_2_20cm_scaffold_7917

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_7917_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..249)
DNA (249bp) protein (83aa)
class IV aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_7917_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

354..779
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00036C731A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD05037.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
13_2_20cm_scaffold_7917_3
unknown

Not on your lists

comp(1093..1296)
DNA (204bp) protein (68aa)

This feature has no annotations

13_2_20cm_scaffold_7917_4

Not on your lists

1641..1937
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JIR5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38423.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_2_20cm_scaffold_7917_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1941..3536
DNA (1596bp) protein (532aa)
FAD dependent oxidoreductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG29_ANADF rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABS27675.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_2_20cm_scaffold_7917_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3683..5011)
DNA (1329bp) protein (443aa)
Amino acid/polyamine/organocation transporter, APC superfamily id=3948639 bin=GWF2_Melioribacter_38_21 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
amino acid transporter Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
amino acid permease
13_2_20cm_scaffold_7917_7
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(5019..5759)
DNA (741bp) protein (247aa)
aminopeptidase DmpA Tax=RBG_13_Aminicenantes_62_12_curated
Peptidase S58 DmpA id=3113877 bin=GWA2_Ignavibacteria_55_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
peptidase S58 DmpA
13_2_20cm_scaffold_7917_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5756..5905)
DNA (150bp) protein (50aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_7917_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5989..6747
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4S4_SALRM
Abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AHG91541.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_7917_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6884..8026)
DNA (1143bp) protein (381aa)
Benzoate-CoA ligase family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMS4_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_2_20cm_scaffold_7917_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8399..10153)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_2_20cm_scaffold_7917_12
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(10150..10899)
DNA (750bp) protein (250aa)
3-oxoacid CoA-transferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U3G7_MYXSD
3-oxoacid CoA-transferase Tax=CG_Elusi_04
3-oxoacid CoA-transferase
13_2_20cm_scaffold_7917_13
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10925..11452)
DNA (528bp) protein (176aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RBG_16_Elusimicrobia_66_12_curated
Subunit A 3-oxoadipate CoA-transferase id=4917917 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
13_2_20cm_scaffold_7917_14
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11428..11778)
DNA (351bp) protein (117aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=GWC2_Elusimicrobia_65_9_curated
3-oxoadipate CoA-transferase (EC:2.8.3.6)
Subunit A 3-oxoadipate CoA-transferase id=4917917 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_2_20cm_scaffold_7917_15
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11775..11990)
DNA (216bp) protein (72aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase id=4970915 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
4-aminobutyrate aminotransferase
13_2_20cm_scaffold_7917_16
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11990..13102)
DNA (1113bp) protein (371aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase id=4970915 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
acetylornithine transaminase
13_2_20cm_scaffold_7917_17
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13099..14472)
DNA (1374bp) protein (458aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase id=4917884 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=RBG_16_Elusimicrobia_66_12_curated
class III aminotransferase
13_2_20cm_scaffold_7917_18
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

14572..15948
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00035E4A6B
tolB; peptidase S9 prolyl oligopeptidase active site domain protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AGY59046.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloe
Displaying 18 items

View Taxonomy