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13_2_20cm_scaffold_8249

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_8249_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..894
DNA (894bp) protein (298aa)
group 1 glycosyl transferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
putative glycosyltransferase (EC:2.4.-.-)
Glycosyl transferase group 1 id=3960020 bin=GWA2_Methylomirabilis_73_35 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_8249_2
unknown

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comp(972..1112)
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_scaffold_8249_3
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1155..1586)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TED9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT38062.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
13_2_20cm_scaffold_8249_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1865..2845
DNA (981bp) protein (327aa)
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=3960025 bin=GWA2_Methylomirabilis_73_35 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide/dipeptide ABC transporter ATPase
13_2_20cm_scaffold_8249_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2926..4521
DNA (1596bp) protein (532aa)
Probable ABC transporter substrate binding protein id=3960026 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter substrate-binding protein
13_2_20cm_scaffold_8249_6
unknown

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comp(4844..4984)
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_scaffold_8249_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5116..6114
DNA (999bp) protein (333aa)
ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Probable ABC transporter substrate binding protein id=3880333 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein
13_2_20cm_scaffold_8249_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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6291..6995
DNA (705bp) protein (235aa)
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein id=14626482 bin=bin7_NC10_sister species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein Tax=CSP1_6_Rokubacteria
gsiC; glutathione transport system permease GsiC
13_2_20cm_scaffold_8249_9
unknown

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comp(7209..7367)
DNA (159bp) protein (53aa)

This feature has no annotations

13_2_20cm_scaffold_8249_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7499..7762
DNA (264bp) protein (88aa)
Putative peptide ABC transporter permease protein id=3960111 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uncharacterized LOC100637730 Tax=GWA2_Rokubacteria_73_35_curated
gsiD; glutathione transport system permease GsiD
13_2_20cm_scaffold_8249_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7904..8104
DNA (201bp) protein (67aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ferredoxin id=4119970 bin=GWF2_Methylomirabilis_70_14 species=Nocardioidaceae bacterium Broad-1 genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4Fe-4S ferredoxin
13_2_20cm_scaffold_8249_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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8505..9626
DNA (1122bp) protein (374aa)
Acetyl-CoA acetyltransferase-like protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Acetyl-CoA acetyltransferase-like protein id=3960112 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8249_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9628..10056
DNA (429bp) protein (143aa)
id=14626487 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4119967 bin=GWF2_Methylomirabilis_70_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8249_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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10043..11173
DNA (1131bp) protein (377aa)
CaiB/BaiF family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=3960114 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CaiB/BaiF family protein
13_2_20cm_scaffold_8249_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11184..11783
DNA (600bp) protein (200aa)
acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Hypothetical conserved protein id=4124054 bin=GWC2_Methylomirabilis_70_24 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acetyltransferase
13_2_20cm_scaffold_8249_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11861..13441
DNA (1581bp) protein (527aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-isopropylmalate synthase/homocitrate synthase family protein id=3960116 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cimA; alpha-isopropylmalate/homocitrate synthase family transferase
13_2_20cm_scaffold_8249_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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13641..13925
DNA (285bp) protein (95aa)
Transposase, putative id=3960120 bin=GWA2_Methylomirabilis_73_35 species=Acaryochloris marina genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Transposase, putative Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_8249_18
unknown

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comp(13922..14152)
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_8249_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(14170..14847)
DNA (678bp) protein (226aa)
putative transferase protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable transferase protein id=4424806 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
putative transferase protein
13_2_20cm_scaffold_8249_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(14847..15005)
DNA (159bp) protein (53aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Tetratricopeptide TPR_2 id=3960130 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 20 items

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