ggKbase home page

13_2_20cm_scaffold_826

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_826_1
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17..1075)
DNA (1059bp) protein (353aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2T8Q9_9NOCA
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:ELB87022.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.
oxidoreductase, LLM family
13_2_20cm_scaffold_826_2
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1078..1731)
DNA (654bp) protein (218aa)
Coenzyme F420-dependent NADP oxidoreductase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TAP4_9NOCA
Coenzyme F420-dependent NADP oxidoreductase {ECO:0000313|EMBL:ELB87021.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratisla
NADP oxidoreductase coenzyme F420-dependent
13_2_20cm_scaffold_826_3
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1968..2333
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003699D85
Scaffold12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31314.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
13_2_20cm_scaffold_826_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2373..2978)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000370F138
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_scaffold_826_5
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3416..5044
DNA (1629bp) protein (543aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN36345.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
13_2_20cm_scaffold_826_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5104..5973)
DNA (870bp) protein (290aa)
Acid phosphatase {ECO:0000313|EMBL:EWT04668.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
phosphoesterase id=1244752 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
acid phosphatase
13_2_20cm_scaffold_826_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7771..9465
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B30870
Protein-tyrosine kinase {ECO:0000313|EMBL:EHN12182.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
capsular exopolysaccharide family
13_2_20cm_scaffold_826_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9462..11000
DNA (1539bp) protein (513aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) Tax=RBG_16_Actinobacteria_68_12_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFA9_CONWI
13_2_20cm_scaffold_826_9
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11053..12207
DNA (1155bp) protein (385aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Thermococcus sp. AM4 RepID=B7R172_9EURY
glycerol-1-phosphate dehydrogenase
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMA
13_2_20cm_scaffold_826_10
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

12268..13020
DNA (753bp) protein (251aa)
nucleotidyl transferase Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Nucleotidyl transferase id=4763852 bin=GWC2_Elusimicrobia_64_44 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
nucleotidyl transferase
13_2_20cm_scaffold_826_11
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13022..13939
DNA (918bp) protein (306aa)
glycosyl transferase n=1 Tax=Salinispora arenicola RepID=UPI00037EAB07
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AEB44097.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris
13_2_20cm_scaffold_826_12
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13947..15272
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003683CD0
Ligase {ECO:0000313|EMBL:KGM13945.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
13_2_20cm_scaffold_826_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15313..15762
DNA (450bp) protein (150aa)
Oligosaccharide biosynthesis protein Alg14 like protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G657_9CLOT
Oligosaccharide biosynthesis protein Alg14 like protein {ECO:0000313|EMBL:CDB16989.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmenta
oligosaccharide biosynthesis protein alg14 like protein
13_2_20cm_scaffold_826_14
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15750..16313
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034CB3CE
glycosyltransferase family 28 protein
Glycosyltransferase 28 domain {ECO:0000313|EMBL:ABV97717.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain
13_2_20cm_scaffold_826_15
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16310..17101
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W7M5_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45193.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
13_2_20cm_scaffold_826_16
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17290..18699
DNA (1410bp) protein (470aa)
Putative internalin n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U331_9DELT
Putative internalin {ECO:0000313|EMBL:ERK92369.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
PA14 domain-containing protein
Displaying 16 items

View Taxonomy