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13_2_20cm_scaffold_8365

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_8365_1
unknown

Not on your lists

comp(3..443)
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_scaffold_8365_2
unknown

Not on your lists

790..891
DNA (102bp) protein (34aa)

This feature has no annotations

13_2_20cm_scaffold_8365_3
unknown

Not on your lists

1151..1828
DNA (678bp) protein (226aa)

This feature has no annotations

13_2_20cm_scaffold_8365_4
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1838..2776)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE01105.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
13_2_20cm_scaffold_8365_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2892..3182)
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_2_20cm_scaffold_8365_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3274..4248)
DNA (975bp) protein (325aa)
Oxidoreductase domain protein id=2319273 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
NADH-dependent dehydrogenase
13_2_20cm_scaffold_8365_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4258..4944)
DNA (687bp) protein (229aa)
Glycosyltransferase id=2319272 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
family 2 glycosyl transferase
13_2_20cm_scaffold_8365_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4937..5590)
DNA (654bp) protein (218aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate decarboxylase id=2319271 bin=GWA2_Methylomirabilis_73_35 species=Citrobacter freundii genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_8365_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5530..5808)
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14625277 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_8365_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5808..6056)
DNA (249bp) protein (83aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3299399 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8365_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6094..7593)
DNA (1500bp) protein (500aa)
integral membrane sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] Tax=GWA2_Rokubacteria_73_35_curated
Integral membrane sensor signal transduction histidine kinase id=3299505 bin=GWA2_Methylomirabilis_73_35 species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
osmosensitive K+ channel signal transduction histidine kinase
13_2_20cm_scaffold_8365_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7590..8294)
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3299507 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8365_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8260..9024)
DNA (765bp) protein (255aa)
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase with PAS/PAC sensor id=3299509 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
metal dependent phosphohydrolase
13_2_20cm_scaffold_8365_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9009..9395)
DNA (387bp) protein (129aa)
Two component transcriptional regulator, winged helix family id=3299511 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Transcriptional regulatory protein yycF Tax=GWA2_Rokubacteria_73_35_curated
winged helix family two component transcriptional regulator
13_2_20cm_scaffold_8365_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9563..9871)
DNA (309bp) protein (103aa)
Copper binding protein, plastocyanin/azurin family n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PCG2_9MYCO
Plastocyanin
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
13_2_20cm_scaffold_8365_16
unknown

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comp(9917..10039)
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_scaffold_8365_17
unknown

Not on your lists

comp(10039..10149)
DNA (111bp) protein (37aa)

This feature has no annotations

13_2_20cm_scaffold_8365_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10198..10608)
DNA (411bp) protein (137aa)
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14) Tax=GWA2_Rokubacteria_73_35_curated
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain id=3299513 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_8365_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10611..12032)
DNA (1422bp) protein (474aa)
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta id=3212391 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_8365_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12029..12313)
DNA (285bp) protein (95aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain id=2324964 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 20 items

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