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13_2_20cm_scaffold_8559

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_8559_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1..783)
DNA (783bp) protein (261aa)
Sugar ABC transporter permease id=4138999 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
sugar ABC transporter permease
13_2_20cm_scaffold_8559_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(780..1268)
DNA (489bp) protein (163aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=4172266 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar ABC transporter permease
13_2_20cm_scaffold_8559_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1716..3032)
DNA (1317bp) protein (439aa)
Extracellular solute-binding protein family 1 id=4138946 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular solute-binding protein
13_2_20cm_scaffold_8559_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3034..3216)
DNA (183bp) protein (61aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=GWA2_Rokubacteria_73_35_curated
4-oxalocrotonate tautomerase id=4541114 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-oxalocrotonate tautomerase
13_2_20cm_scaffold_8559_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3570..4706)
DNA (1137bp) protein (379aa)
Amidohydrolase 2 protein id=2312825 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative hydrolase Tax=GWA2_Rokubacteria_73_35_curated
putative hydrolase
13_2_20cm_scaffold_8559_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5007..5828
DNA (822bp) protein (274aa)
lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
WGS project CABT00000000 data, contig 2.14 id=3824668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_8559_7
unknown

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5825..6007
DNA (183bp) protein (61aa)

This feature has no annotations

13_2_20cm_scaffold_8559_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(6152..7024)
DNA (873bp) protein (291aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4734852 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_8559_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7204..7482
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX04989.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_scaffold_8559_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7510..7779)
DNA (270bp) protein (90aa)
cysM; cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47] Tax=GWA2_Rokubacteria_73_35_curated
Cysteine synthase, O-acetylserine (Thiol) lyase B id=3821888 bin=GWA2_Methylomirabilis_73_35 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysM; cysteine synthase B
13_2_20cm_scaffold_8559_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7731..8387)
DNA (657bp) protein (219aa)
cysM; cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47] Tax=GWA2_Rokubacteria_73_35_curated
Cysteine synthase, O-acetylserine (Thiol) lyase B id=3821888 bin=GWA2_Methylomirabilis_73_35 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysM; cysteine synthase B
13_2_20cm_scaffold_8559_12
unknown

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8395..8658
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_8559_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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8655..9335
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJC6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43500.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_8559_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9496..11220
DNA (1725bp) protein (575aa)
MscS Mechanosensitive ion channel id=2507296 bin=GWA2_Elusimicrobia_69_24 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
mechanosensitive ion channel protein MscS; K16052 MscS family membrane protein YnaI Tax=GWC2_Rokubacteria_70_16_curated
mechanosensitive ion channel protein MscS
13_2_20cm_scaffold_8559_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11249..12277)
DNA (1029bp) protein (343aa)
Alpha amylase catalytic region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG48_9BACT
Alpha amylase catalytic region {ECO:0000313|EMBL:EEF61210.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sourc
alpha amylase
Displaying 15 items

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