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13_2_20cm_scaffold_865

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_865_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..585)
-----------------
DNA (585bp)
protein (195aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1187851 species="Ba
DNA topoisomerase 4 subunit A n=1 Tax=Rhodovulum sp. PH10 RepID=J6J583_9RHOB
DNA topoisomerase IV subunit A
13_2_20cm_scaffold_865_2
unknown

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838..1038
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

13_2_20cm_scaffold_865_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1042..1821)
-----------------
DNA (780bp)
protein (260aa)
DNA repair protein RecO n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QP00_9BRAD
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=709797 species="Bacteria; Proteobacteria; Alp
recO; DNA repair protein RecO
13_2_20cm_scaffold_865_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1824..2810)
-----------------
DNA (987bp)
protein (329aa)
GTPase Era n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9Y8_9BRAD
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
era; GTP-binding protein Era
13_2_20cm_scaffold_865_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2803..3672)
-----------------
DNA (870bp)
protein (290aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Rhodovulum sp. PH10 RepID=J5PLE0_9RHOB rbh
13_2_20cm_scaffold_865_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3618..4373)
-----------------
DNA (756bp)
protein (252aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
peptidase S26A, signal peptidase I (EC:3.4.21.89)
signal peptidase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037FAC72
13_2_20cm_scaffold_865_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4633..5073)
-----------------
DNA (441bp)
protein (147aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
4''''-phosphopantetheinyl transferase n=1 Tax=Xanthobacteraceae RepID=UPI00037B3B43
holo-acyl-carrier-protein synthase
13_2_20cm_scaffold_865_8
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5070..5816)
-----------------
DNA (747bp)
protein (249aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y8M6_9BRAD
pdxJ; pyridoxine 5'-phosphate synthase
13_2_20cm_scaffold_865_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5910..8246)
-----------------
DNA (2337bp)
protein (779aa)
(p)ppGpp synthetase I (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD03_9RHOB rbh
GTP pyrophosphokinase {ECO:0000313|EMBL:EJW11276.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.
13_2_20cm_scaffold_865_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8408..8800)
-----------------
DNA (393bp)
protein (131aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVZ0_9BRAD
DNA-directed RNA polymerase subunit omega
13_2_20cm_scaffold_865_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9123..9776
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LDM6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJW11278.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
13_2_20cm_scaffold_865_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9754..10425
-----------------
DNA (672bp)
protein (224aa)
Uracil-DNA glycosylase superfamily protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0F4_AZOC5
uracil-DNA glycosylase
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:BAF87249.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="A
13_2_20cm_scaffold_865_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10491..11057)
-----------------
DNA (567bp)
protein (189aa)
Redoxin domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IM15_XANP2
Peroxiredoxin Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
redoxin domain-containing protein
13_2_20cm_scaffold_865_14
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11054..11485)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00035F971F
Wenxma_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ71126.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenx
hypothetical protein
13_2_20cm_scaffold_865_15
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11607..11783)
-----------------
DNA (177bp)
protein (59aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Micromonospora RepID=D9T952_MICAI
Extradiol ring-cleaving dioxygenase {ECO:0000313|EMBL:EWM64097.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying 15 items

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