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13_2_20cm_scaffold_886

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_886_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..667)
DNA (666bp) protein (222aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB77_GEMAT
13_2_20cm_scaffold_886_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

725..1231
DNA (507bp) protein (169aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_886_3
unknown

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1269..1532
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_886_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1497..2240)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB82_GEMAT
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF62
13_2_20cm_scaffold_886_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2244..3584)
DNA (1341bp) protein (447aa)
Putative multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB83_GEMAT
putative multidrug resistance protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MATE efflux family protein
13_2_20cm_scaffold_886_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4159..5547)
DNA (1389bp) protein (463aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
diguanylate cyclase
13_2_20cm_scaffold_886_7
unknown

Not on your lists

comp(5637..5996)
DNA (360bp) protein (120aa)

This feature has no annotations

13_2_20cm_scaffold_886_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6102..6869)
DNA (768bp) protein (256aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_886_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6871..8058)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase-like, ParA/MinD
13_2_20cm_scaffold_886_10
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8087..8743
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKC4_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK17876.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntro
13_2_20cm_scaffold_886_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8748..9095)
DNA (348bp) protein (116aa)
protein of unknown function Spy-related protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_886_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9203..11026
DNA (1824bp) protein (608aa)
Putative permease n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DEF9_MYXXD
permease
Permease {ECO:0000313|EMBL:AHG87930.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_886_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11035..12498)
DNA (1464bp) protein (488aa)
hypothetical protein; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Peptidase, M20E (Gly-X carboxypeptidase) subfamily n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DA13_MYXXD
hypothetical protein
13_2_20cm_scaffold_886_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12543..13673)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0M4_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_2_20cm_scaffold_886_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13725..14735)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoesterase RecJ domain protein
13_2_20cm_scaffold_886_16
unknown

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comp(14827..15288)
DNA (462bp) protein (154aa)

This feature has no annotations

13_2_20cm_scaffold_886_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15345..16700)
DNA (1356bp) protein (452aa)
Amino acid permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAV9_MYXSD
amino acid permease Tax=GWC2_Gemmatimonadetes_71_10_curated
amino acid permease
13_2_20cm_scaffold_886_18
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16928..17380)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VL02_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ08172.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 711
13_2_20cm_scaffold_886_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17483..17653)
DNA (171bp) protein (57aa)
protein of unknown function DUF820
Uncharacterized protein {ECO:0000313|EMBL:AHG87815.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 19 items

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