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13_2_20cm_scaffold_9100

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_9100_1
unknown

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2..562
DNA (561bp) protein (187aa)

This feature has no annotations

13_2_20cm_scaffold_9100_2
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(650..2095)
DNA (1446bp) protein (482aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798
Glutamine synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBY2_THET1 rbh
glutamine synthetase, type I rbh
13_2_20cm_scaffold_9100_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(2357..3238)
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
UniRef90_D6TBL0 2-hydroxy-3-oxopropionate reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBL0_9CHLR id=1245701 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_2_20cm_scaffold_9100_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3331..4239)
DNA (909bp) protein (303aa)
Transcriptional regulator, LacI family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ91_NOCSJ
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABL83976.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (st
13_2_20cm_scaffold_9100_5
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4253..5140
DNA (888bp) protein (296aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
13_2_20cm_scaffold_9100_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5025..5756)
DNA (732bp) protein (244aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK2_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFH87986.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobact
livG; branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_9100_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(5753..6760)
DNA (1008bp) protein (336aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTC1_ACIC1
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABK52681.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acid
13_2_20cm_scaffold_9100_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(6763..7641)
DNA (879bp) protein (293aa)
Inner-membrane translocator n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK4_9CHLR
Inner-membrane translocator {ECO:0000313|EMBL:EFH87988.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sour
inner-membrane translocator
13_2_20cm_scaffold_9100_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(7649..8803)
DNA (1155bp) protein (385aa)
Extracellular ligand-binding receptor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK5_9CHLR
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFH87989.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobact
extracellular ligand-binding receptor
13_2_20cm_scaffold_9100_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(9114..10406)
DNA (1293bp) protein (431aa)
Peptidase M24 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK7_9CHLR
Peptidase M24 {ECO:0000313|EMBL:EFH87991.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 4
peptidase M24
13_2_20cm_scaffold_9100_11
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10449..10787)
DNA (339bp) protein (113aa)
thioredoxin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E511
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
trxA; thioredoxin
13_2_20cm_scaffold_9100_12
RBG_16_OP11_Gottesmanbacteria_52_11_curated, Gottesmanbacteria, Microgenomates, Bacteria

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10874..12349
DNA (1476bp) protein (492aa)
Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FDY3_9CHLO id=66679 bin=ACD48 species=Micromonas sp. RCC299 genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_OP11_Gottesmanbacteria_52_11_curated
conserved membrane protein of unknown function
13_2_20cm_scaffold_9100_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12471..12974
DNA (504bp) protein (168aa)
acetyltransferase (EC:2.3.1.-)
Putative acetyltransferase protein {ECO:0000313|EMBL:CAN91167.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAN91167.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangii
Putative acetyltransferase protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQF1_9DELT
13_2_20cm_scaffold_9100_14
unknown

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comp(12914..13387)
DNA (474bp) protein (158aa)

This feature has no annotations

13_2_20cm_scaffold_9100_15
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13384..13617)
DNA (234bp) protein (78aa)
transcription elongation factor GreB
Transcription elongation factor GreA id=2466181 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1445513 species="Bacteria; Proteobacteria; Gammaproteob
13_2_20cm_scaffold_9100_16
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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13685..14926
DNA (1242bp) protein (414aa)
DNA-binding protein n=1 Tax=Salinispora pacifica RepID=UPI00036F1062
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADL45435.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiac
13_2_20cm_scaffold_9100_17
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14940..15539)
DNA (600bp) protein (200aa)
menaquinol:cytochrome c oxidoreductase-like protein n=2 Tax=Paenibacillus larvae RepID=UPI0001F85B30
qcrC; menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC {ECO:0000313|EMBL:AHD05213.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source=
13_2_20cm_scaffold_9100_18
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15554..16249)
DNA (696bp) protein (232aa)
Cytochrome b/b6 domain protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPZ7_KYRT2
cytochrome b/b6 protein
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:ADG06406.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 291
13_2_20cm_scaffold_9100_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(16251..16865)
DNA (615bp) protein (205aa)
putative quinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (EC:1.10.2.2)
Putative Quinol-cytochrome c reductase, iron-sulfur subunit (Rieske iron-sulfur protein) {ECO:0000313|EMBL:CBK43562.1}; EC=1.10.2.2 {ECO:0000313|EMBL:CBK43562.1};; TaxID=330214 species="Bacteria; Nitr
Putative Quinol-cytochrome c reductase, iron-sulfur subunit (Rieske iron-sulfur protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJI8_9BACT
13_2_20cm_scaffold_9100_20
unknown

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16942..17076
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 20 items

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