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13_2_20cm_scaffold_938

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_938_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..611
DNA (609bp) protein (203aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_2_20cm_scaffold_938_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

601..1515
DNA (915bp) protein (305aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_2_20cm_scaffold_938_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1524..2570
DNA (1047bp) protein (349aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen IX and coproporphyrinogen III oxidase id=1975398 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_2_20cm_scaffold_938_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2545..3597)
DNA (1053bp) protein (351aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:CDM64422.1}; EC=1.14.14.5 {ECO:0000313|EMBL:CDM64422.1};; TaxID=454194 species="Bacteria;
ssuD; alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QP10_9CYAN
13_2_20cm_scaffold_938_5
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(3597..4541)
DNA (945bp) protein (315aa)
D-alanine--D-alanine ligase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QP68_9CYAN rbh
ddl; D-alanine--D-alanine ligase
D-alanine--D-alanine ligase {ECO:0000313|EMBL:AGY60741.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
13_2_20cm_scaffold_938_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4538..5065)
DNA (528bp) protein (176aa)
FMN reductase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBI3_ACIAP
FMN reductase
FMN reductase {ECO:0000313|EMBL:ADX46148.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 1
13_2_20cm_scaffold_938_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5274..7283)
DNA (2010bp) protein (670aa)
Transketolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEC1_GEMAT rbh
transketolase
Transketolase {ECO:0000313|EMBL:AHG89069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_938_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7280..7600)
DNA (321bp) protein (107aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_938_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7658..8674
DNA (1017bp) protein (339aa)
WD40 domain protein beta Propeller n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40-like beta Propeller containing protein
13_2_20cm_scaffold_938_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8671..9408
DNA (738bp) protein (246aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K1_GEMAT
signal peptidase I
13_2_20cm_scaffold_938_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9447..9641)
DNA (195bp) protein (65aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_2_20cm_scaffold_938_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9681..9947)
DNA (267bp) protein (89aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_938_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10040..10327
DNA (288bp) protein (96aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_938_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10388..10696
DNA (309bp) protein (103aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_938_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10693..13350)
DNA (2658bp) protein (886aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_2_20cm_scaffold_938_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13469..14353
DNA (885bp) protein (295aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_938_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14346..15155)
DNA (810bp) protein (270aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative enzyme (3.4.-) id=1974900 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alpha/beta superfamily hydrolase
13_2_20cm_scaffold_938_18
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15194..16096
DNA (903bp) protein (301aa)
ADP-ribosyl-(Dinitrogen reductase) hydrolase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AK23_NATGS
ADP-ribosylglycohydrolase
ADP-ribosyl-(Dinitrogen reductase) hydrolase {ECO:0000313|EMBL:ELY65291.1}; ADP-ribosylglycohydrolase {ECO:0000313|EMBL:AFZ73804.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrial
13_2_20cm_scaffold_938_19
unknown

Not on your lists

comp(16098..16628)
DNA (531bp) protein (177aa)

This feature has no annotations

13_2_20cm_scaffold_938_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(16697..16897)
DNA (201bp) protein (67aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Actinobacteria_67_10_curated
cold-shock protein
Cold-shock DNA-binding domain protein id=2785126 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_938_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17153..18778
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
Displaying 21 items

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