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13_2_20cm_scaffold_925

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_925_1
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1..840
DNA (840bp) protein (280aa)
acetylornithine deacetylase n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B40CDF
acetylornithine deacetylase
Putative acetylornithine deacetylase {ECO:0000313|EMBL:ACO47637.2}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus d
13_2_20cm_scaffold_925_2
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists


comp(889..2205)
DNA (1317bp) protein (439aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=GWE2_Spirochaetes_31_10_curated
Glycine--tRNA ligase id=1266806 bin=GWE1_Spirochaetes_32_154 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
glycyl-tRNA synthetase
13_2_20cm_scaffold_925_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2255..2878)
DNA (624bp) protein (208aa)
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=1245837 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
DNA repair protein RecO
13_2_20cm_scaffold_925_4
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(2979..3506)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003712FB0
hypothetical protein Tax=RBG_16_Chloroflexi_64_43_curated
hypothetical protein
13_2_20cm_scaffold_925_5
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4302..5255)
DNA (954bp) protein (318aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RA27_AMMDK
Ribose-phosphate pyrophosphokinase Tax=S_Thermoanaerobacterales_50_218
13_2_20cm_scaffold_925_6
unknown

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5479..6066
DNA (588bp) protein (196aa)

This feature has no annotations

13_2_20cm_scaffold_925_7
unknown

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6157..6570
DNA (414bp) protein (138aa)

This feature has no annotations

13_2_20cm_scaffold_925_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

6614..9106
DNA (2493bp) protein (831aa)
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L019_THERP
13_2_20cm_scaffold_925_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9012..9770)
DNA (759bp) protein (253aa)
CobB/CobQ domain protein glutamine amidotransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJA8_ROSCS
CobB/CobQ glutamine amidotransferase
CobB/CobQ domain protein glutamine amidotransferase {ECO:0000313|EMBL:ABU57578.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexu
13_2_20cm_scaffold_925_10
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

comp(9743..11110)
DNA (1368bp) protein (456aa)
hypothetical protein id=24518465 bin=RBG_19FT_COMBO_GAL15_69_19 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=BJP_IG2158_Actinobacteria_57_21
13_2_20cm_scaffold_925_11
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11107..11859)
DNA (753bp) protein (251aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NB63_9DEIN
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_2_20cm_scaffold_925_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11874..12431)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI0003686A7A
carbonic anhydrase
Carbonic anhydrases/acetyltransferases isoleucine patch superfamily-like protein {ECO:0000313|EMBL:ABG04710.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobac
13_2_20cm_scaffold_925_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists


12485..12838
DNA (354bp) protein (118aa)
30S ribosomal protein S20 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=RS20_ROSS1
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Chloroflexi_68_14_curated
rpsT; 30S ribosomal protein S20
13_2_20cm_scaffold_925_14
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12842..13801)
DNA (960bp) protein (320aa)
DNA polymerase III, delta subunit n=2 Tax=Brevibacillus RepID=J2R3R4_9BACL
DNA polymerase III, delta subunit
Tax=BJP_IG2102_Clostridiales_34_350
13_2_20cm_scaffold_925_15
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(13815..16028)
DNA (2214bp) protein (738aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQZ9_9FIRM
DNA internalization-related competence protein ComEC/Rec2 Tax=RBG_16_Chloroflexi_60_22_curated
DNA internalization-like competence protein ComEC/Rec2
13_2_20cm_scaffold_925_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16025..16504)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036744F2
Uncharacterized protein {ECO:0000313|EMBL:KGF12406.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
competence protein ComEA
13_2_20cm_scaffold_925_17
unknown

Not on your lists

16789..17202
DNA (414bp) protein (138aa)

This feature has no annotations

13_2_20cm_scaffold_925_18
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17253..19691
DNA (2439bp) protein (813aa)
(1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase GlgY {ECO:0000313|EMBL:EMS80364.1}; EC=5.4.99.15 {ECO:0000313|EMBL:EMS80364.1};; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Des
malto-oligosyltrehalose synthase (EC:5.4.99.15)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036BC6D7 rbh
13_2_20cm_scaffold_925_19
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19763..20305
DNA (543bp) protein (181aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000380CF03
13_2_20cm_scaffold_925_20
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20302..21195
DNA (894bp) protein (298aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000380CF03
malto-oligosyltrehalose trehalohydrolase
13_2_20cm_scaffold_925_21
Mycobacterium sp. MOTT36Y, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21188..23317
DNA (2130bp) protein (710aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1168287 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Glycogen debranching protein GlgX n=1 Tax=Mycobacterium sp. MOTT36Y RepID=I2AHW9_9MYCO
glycogen debranching protein GlgX
13_2_20cm_scaffold_925_22
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(23301..24389)
DNA (1089bp) protein (363aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=309799 species="Bacteria; Dictyog
Leucine--tRNA ligase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YFG5_DICT6
Suspect SCG annotation. See neighboring gene [13_2_20cm_scaffold_925_23].
13_2_20cm_scaffold_925_23
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


comp(24370..25692)
DNA (1323bp) protein (441aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=276 species="Bacteria; Deinococcu
leucyl-tRNA synthetase n=1 Tax=Thermus oshimai RepID=UPI000360B4BD
leucyl-tRNA synthetase
Displaying 23 items

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